Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 AC127242.3-201ENSMUST00000222009 580 ntBASIC7.26□□□□□ -1.25
Sh3rf2Q8BZT2 AC165157.1-201ENSMUST00000222981 580 ntBASIC7.26□□□□□ -1.25
Sh3rf2Q8BZT2 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC7.26□□□□□ -1.25
Sh3rf2Q8BZT2 AC133598.3-204ENSMUST00000224260 767 ntBASIC7.26□□□□□ -1.25
Sh3rf2Q8BZT2 AC121542.2-201ENSMUST00000227529 400 ntBASIC7.26□□□□□ -1.25
Sh3rf2Q8BZT2 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Sh3rf2Q8BZT2 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Sh3rf2Q8BZT2 Gm24924-201ENSMUST00000084007 164 ntBASIC7.26□□□□□ -1.25
Sh3rf2Q8BZT2 Gm16020-201ENSMUST00000084281 210 ntBASIC7.26□□□□□ -1.25
Sh3rf2Q8BZT2 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Sh3rf2Q8BZT2 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Sh3rf2Q8BZT2 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Sh3rf2Q8BZT2 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC7.26□□□□□ -1.25
Sh3rf2Q8BZT2 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC7.26□□□□□ -1.25
Sh3rf2Q8BZT2 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Sh3rf2Q8BZT2 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Sh3rf2Q8BZT2 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Sh3rf2Q8BZT2 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Sh3rf2Q8BZT2 CT025619.3-201ENSMUST00000216299 3267 ntBASIC7.26□□□□□ -1.25
Sh3rf2Q8BZT2 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC7.26□□□□□ -1.25
Sh3rf2Q8BZT2 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Sh3rf2Q8BZT2 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Sh3rf2Q8BZT2 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Sh3rf2Q8BZT2 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Sh3rf2Q8BZT2 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Gm44777-201ENSMUST00000205941 4052 ntBASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Gm43429-201ENSMUST00000197889 2251 ntBASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Gm13878-201ENSMUST00000117986 577 ntBASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Gm12740-201ENSMUST00000118794 308 ntBASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Gm5133-201ENSMUST00000118940 1255 ntBASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Gm14251-201ENSMUST00000122133 279 ntBASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Gm22275-201ENSMUST00000122470 310 ntBASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Gm4613-201ENSMUST00000165488 276 ntBASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Gm22642-201ENSMUST00000175352 252 ntBASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Gm27360-201ENSMUST00000183487 80 ntBASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 AC124184.1-201ENSMUST00000218167 283 ntBASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 AC159188.3-201ENSMUST00000224199 880 ntBASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Gm2840-201ENSMUST00000048361 411 ntBASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Gm24451-201ENSMUST00000083353 133 ntBASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Gm37080-201ENSMUST00000194804 2404 ntBASIC7.25□□□□□ -1.25
Sh3rf2Q8BZT2 Gm42490-201ENSMUST00000198595 2064 ntBASIC7.24□□□□□ -1.25
Sh3rf2Q8BZT2 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC7.24□□□□□ -1.25
Sh3rf2Q8BZT2 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Sh3rf2Q8BZT2 Gm43099-201ENSMUST00000198943 5241 ntBASIC7.24□□□□□ -1.25
Sh3rf2Q8BZT2 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Sh3rf2Q8BZT2 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
Sh3rf2Q8BZT2 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC7.24□□□□□ -1.25
Sh3rf2Q8BZT2 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Sh3rf2Q8BZT2 Gm24519-201ENSMUST00000104507 132 ntBASIC7.24□□□□□ -1.25
Sh3rf2Q8BZT2 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Sh3rf2Q8BZT2 Gm8812-201ENSMUST00000118496 412 ntBASIC7.24□□□□□ -1.25
Sh3rf2Q8BZT2 Gm16420-201ENSMUST00000120258 856 ntBASIC7.24□□□□□ -1.25
Sh3rf2Q8BZT2 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC7.24□□□□□ -1.25
Sh3rf2Q8BZT2 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC7.24□□□□□ -1.25
Sh3rf2Q8BZT2 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC7.24□□□□□ -1.25
Sh3rf2Q8BZT2 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Sh3rf2Q8BZT2 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Sh3rf2Q8BZT2 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Sh3rf2Q8BZT2 Gm25969-201ENSMUST00000157166 132 ntBASIC7.24□□□□□ -1.25
Sh3rf2Q8BZT2 Gm24682-201ENSMUST00000158764 137 ntBASIC7.24□□□□□ -1.25
Sh3rf2Q8BZT2 Gm2619-202ENSMUST00000166777 651 ntBASIC7.24□□□□□ -1.25
Sh3rf2Q8BZT2 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms