Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 AC156802.2-201ENSMUST00000225239 5740 ntBASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Gm43789-201ENSMUST00000199275 2472 ntBASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Gm9226-201ENSMUST00000188352 3489 ntBASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Gm21152-201ENSMUST00000190271 3483 ntBASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Wipf3-206ENSMUST00000172046 4204 ntAPPRIS P4 TSL 5 BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Adgrl2-214ENSMUST00000199238 4670 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Gm26410-201ENSMUST00000157670 261 ntBASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Gm23896-201ENSMUST00000158109 130 ntBASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Gm6055-201ENSMUST00000180532 378 ntBASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Gm38237-201ENSMUST00000193366 376 ntBASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Gm43621-201ENSMUST00000202733 2022 ntBASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Gm3800-201ENSMUST00000221086 554 ntBASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Gm2139-201ENSMUST00000222569 1075 ntBASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Pdgfra-201ENSMUST00000000476 6549 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Gm21731-201ENSMUST00000079524 489 ntBASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 AC111010.1-203ENSMUST00000227287 1548 ntBASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 AC123832.1-201ENSMUST00000214120 2371 ntBASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Col16a1Q8BLX7 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Adgrl3-216ENSMUST00000121641 5151 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Smpd4-203ENSMUST00000090159 4565 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Gm44669-201ENSMUST00000207774 1969 ntBASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Scn2b-202ENSMUST00000170998 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Tns1-208ENSMUST00000187584 9916 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Gm4342-201ENSMUST00000118982 367 ntBASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Gm7189-201ENSMUST00000119811 429 ntBASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Gm23426-201ENSMUST00000122483 318 ntBASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Gm27299-201ENSMUST00000184593 103 ntBASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Gm37072-201ENSMUST00000194570 837 ntBASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Gm18430-201ENSMUST00000197534 682 ntBASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Gm44422-201ENSMUST00000204142 1025 ntBASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 AC156790.1-201ENSMUST00000226572 559 ntBASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 CT025619.3-201ENSMUST00000216299 3267 ntBASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Trio-210ENSMUST00000227337 6375 ntBASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Col16a1Q8BLX7 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Col16a1Q8BLX7 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Col16a1Q8BLX7 Nlrc5-207ENSMUST00000211816 7578 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Col16a1Q8BLX7 Gm20045-201ENSMUST00000192658 5577 ntBASIC9.21□□□□□ -0.94
Col16a1Q8BLX7 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col16a1Q8BLX7 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Col16a1Q8BLX7 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col16a1Q8BLX7 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col16a1Q8BLX7 Adgrl3-208ENSMUST00000118442 5101 ntTSL 5 BASIC9.21□□□□□ -0.94
Col16a1Q8BLX7 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col16a1Q8BLX7 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Col16a1Q8BLX7 Cacna1f-202ENSMUST00000115726 6079 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col16a1Q8BLX7 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Col16a1Q8BLX7 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC9.21□□□□□ -0.94
Col16a1Q8BLX7 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Col16a1Q8BLX7 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Col16a1Q8BLX7 Gm13702-201ENSMUST00000118542 825 ntBASIC9.2□□□□□ -0.94
Col16a1Q8BLX7 Gm12242-201ENSMUST00000118824 738 ntBASIC9.2□□□□□ -0.94
Col16a1Q8BLX7 Gm5319-201ENSMUST00000118965 873 ntBASIC9.2□□□□□ -0.94
Col16a1Q8BLX7 Gm12135-201ENSMUST00000119170 466 ntBASIC9.2□□□□□ -0.94
Col16a1Q8BLX7 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Col16a1Q8BLX7 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC9.2□□□□□ -0.94
Col16a1Q8BLX7 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms