Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Rora-201ENSMUST00000034766 10878 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nphp4P59240 Plec-203ENSMUST00000071869 14917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nphp4P59240 Grk1-202ENSMUST00000209909 7431 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Nphp4P59240 Grk1-201ENSMUST00000033827 7425 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nphp4P59240 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nphp4P59240 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Nphp4P59240 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nphp4P59240 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nphp4P59240 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nphp4P59240 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Nphp4P59240 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC9.55□□□□□ -0.88
Nphp4P59240 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Nphp4P59240 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Nphp4P59240 Gm14116-201ENSMUST00000117733 805 ntBASIC9.55□□□□□ -0.88
Nphp4P59240 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC9.55□□□□□ -0.88
Nphp4P59240 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nphp4P59240 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC9.55□□□□□ -0.88
Nphp4P59240 Gm25722-201ENSMUST00000157498 279 ntBASIC9.55□□□□□ -0.88
Nphp4P59240 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC9.55□□□□□ -0.88
Nphp4P59240 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nphp4P59240 Gm27295-201ENSMUST00000184264 153 ntBASIC9.55□□□□□ -0.88
Nphp4P59240 Gm43689-201ENSMUST00000195951 427 ntBASIC9.55□□□□□ -0.88
Nphp4P59240 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Nphp4P59240 Gm38840-201ENSMUST00000204716 843 ntBASIC9.55□□□□□ -0.88
Nphp4P59240 Gm44982-201ENSMUST00000208795 471 ntBASIC9.55□□□□□ -0.88
Nphp4P59240 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC9.55□□□□□ -0.88
Nphp4P59240 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC9.55□□□□□ -0.88
Nphp4P59240 AC154834.1-201ENSMUST00000224697 358 ntBASIC9.55□□□□□ -0.88
Nphp4P59240 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nphp4P59240 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nphp4P59240 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nphp4P59240 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC9.55□□□□□ -0.88
Nphp4P59240 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nphp4P59240 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Nphp4P59240 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nphp4P59240 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nphp4P59240 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nphp4P59240 Gm29670-201ENSMUST00000190228 2491 ntBASIC9.55□□□□□ -0.88
Nphp4P59240 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nphp4P59240 Gm42866-201ENSMUST00000195919 3304 ntBASIC9.54□□□□□ -0.88
Nphp4P59240 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC9.54□□□□□ -0.88
Nphp4P59240 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Nphp4P59240 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Nphp4P59240 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC9.54□□□□□ -0.88
Nphp4P59240 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC9.54□□□□□ -0.88
Nphp4P59240 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nphp4P59240 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC9.54□□□□□ -0.88
Nphp4P59240 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC9.54□□□□□ -0.88
Nphp4P59240 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Nphp4P59240 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Nphp4P59240 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Nphp4P59240 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nphp4P59240 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nphp4P59240 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nphp4P59240 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Nphp4P59240 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Nphp4P59240 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nphp4P59240 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nphp4P59240 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
Nphp4P59240 Gm14615-201ENSMUST00000117575 1816 ntBASIC9.54□□□□□ -0.88
Nphp4P59240 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Nphp4P59240 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nphp4P59240 Gm43606-201ENSMUST00000195938 3556 ntBASIC9.54□□□□□ -0.88
Nphp4P59240 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
Nphp4P59240 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nphp4P59240 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nphp4P59240 Gm5601-201ENSMUST00000118909 972 ntBASIC9.54□□□□□ -0.88
Nphp4P59240 Gm11445-201ENSMUST00000119101 532 ntBASIC9.54□□□□□ -0.88
Nphp4P59240 Gm15596-201ENSMUST00000121139 784 ntBASIC9.54□□□□□ -0.88
Nphp4P59240 Gm12101-201ENSMUST00000121590 390 ntBASIC9.54□□□□□ -0.88
Nphp4P59240 Gm3585-201ENSMUST00000173438 875 ntBASIC9.54□□□□□ -0.88
Nphp4P59240 Gm27972-201ENSMUST00000184720 137 ntBASIC9.54□□□□□ -0.88
Nphp4P59240 Gm7804-202ENSMUST00000194187 854 ntBASIC9.54□□□□□ -0.88
Nphp4P59240 Gm19088-201ENSMUST00000198800 566 ntBASIC9.54□□□□□ -0.88
Nphp4P59240 Gm42673-201ENSMUST00000202676 337 ntBASIC9.54□□□□□ -0.88
Nphp4P59240 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC9.54□□□□□ -0.88
Nphp4P59240 Gm9367-201ENSMUST00000205703 546 ntBASIC9.54□□□□□ -0.88
Nphp4P59240 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC9.54□□□□□ -0.88
Nphp4P59240 AC163660.1-201ENSMUST00000223696 818 ntBASIC9.54□□□□□ -0.88
Nphp4P59240 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Nphp4P59240 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nphp4P59240 Gm5514-201ENSMUST00000060477 306 ntBASIC9.54□□□□□ -0.88
Nphp4P59240 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
Nphp4P59240 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
Nphp4P59240 Dsc3-201ENSMUST00000115848 5333 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
Nphp4P59240 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nphp4P59240 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nphp4P59240 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nphp4P59240 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nphp4P59240 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nphp4P59240 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nphp4P59240 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nphp4P59240 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nphp4P59240 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Nphp4P59240 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Nphp4P59240 Plec-221ENSMUST00000171562 14944 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Nphp4P59240 Plec-204ENSMUST00000072692 14944 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nphp4P59240 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Nphp4P59240 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Nphp4P59240 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms