Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm43141-201ENSMUST00000199695 274 ntBASIC7.95□□□□□ -1.14
Brca1P48754 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC7.95□□□□□ -1.14
Brca1P48754 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC7.95□□□□□ -1.14
Brca1P48754 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC7.95□□□□□ -1.14
Brca1P48754 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC7.95□□□□□ -1.14
Brca1P48754 AC120375.2-202ENSMUST00000228722 397 ntBASIC7.95□□□□□ -1.14
Brca1P48754 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Brca1P48754 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Brca1P48754 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
Brca1P48754 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Brca1P48754 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Brca1P48754 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Brca1P48754 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Brca1P48754 Clasp2-202ENSMUST00000163895 4112 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Brca1P48754 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Brca1P48754 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC7.95□□□□□ -1.14
Brca1P48754 Tiam1-201ENSMUST00000002588 7290 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Brca1P48754 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC7.95□□□□□ -1.14
Brca1P48754 Gm44194-201ENSMUST00000204222 3229 ntBASIC7.95□□□□□ -1.14
Brca1P48754 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Brca1P48754 Gm42692-201ENSMUST00000199482 2833 ntBASIC7.95□□□□□ -1.14
Brca1P48754 Rassf2-202ENSMUST00000103182 4589 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Brca1P48754 Pcdhb11-201ENSMUST00000053073 4419 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Brca1P48754 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Brca1P48754 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC7.94□□□□□ -1.14
Brca1P48754 Plagl2-202ENSMUST00000109795 5571 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Brca1P48754 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Brca1P48754 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Brca1P48754 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Brca1P48754 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC7.94□□□□□ -1.14
Brca1P48754 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Brca1P48754 Gm13702-201ENSMUST00000118542 825 ntBASIC7.94□□□□□ -1.14
Brca1P48754 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC7.94□□□□□ -1.14
Brca1P48754 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Brca1P48754 Gm7952-201ENSMUST00000180540 984 ntBASIC7.94□□□□□ -1.14
Brca1P48754 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Brca1P48754 Gm8192-201ENSMUST00000182196 958 ntBASIC7.94□□□□□ -1.14
Brca1P48754 Gm28846-201ENSMUST00000189161 368 ntBASIC7.94□□□□□ -1.14
Brca1P48754 Gm37637-201ENSMUST00000195540 1256 ntBASIC7.94□□□□□ -1.14
Brca1P48754 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC7.94□□□□□ -1.14
Brca1P48754 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC7.94□□□□□ -1.14
Brca1P48754 Gm4803-201ENSMUST00000218729 1279 ntBASIC7.94□□□□□ -1.14
Brca1P48754 AL713985.1-201ENSMUST00000219030 420 ntBASIC7.94□□□□□ -1.14
Brca1P48754 AC154616.2-201ENSMUST00000227978 398 ntBASIC7.94□□□□□ -1.14
Brca1P48754 AC154806.5-204ENSMUST00000228900 867 ntBASIC7.94□□□□□ -1.14
Brca1P48754 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Brca1P48754 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Brca1P48754 Gm8526-201ENSMUST00000079153 475 ntBASIC7.94□□□□□ -1.14
Brca1P48754 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Brca1P48754 Rreb1-201ENSMUST00000037232 8395 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Brca1P48754 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Brca1P48754 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC7.94□□□□□ -1.14
Brca1P48754 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Brca1P48754 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Brca1P48754 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Brca1P48754 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC7.94□□□□□ -1.14
Brca1P48754 Gm37109-201ENSMUST00000195475 2254 ntBASIC7.94□□□□□ -1.14
Brca1P48754 Clasp1-214ENSMUST00000189570 5502 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Brca1P48754 Nup133-201ENSMUST00000044795 5808 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Brca1P48754 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Brca1P48754 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Brca1P48754 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Brca1P48754 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Brca1P48754 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Brca1P48754 Bmpr1b-201ENSMUST00000029948 5349 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Brca1P48754 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.94□□□□□ -1.14
Brca1P48754 Gm13983-201ENSMUST00000118018 865 ntBASIC7.94□□□□□ -1.14
Brca1P48754 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC7.94□□□□□ -1.14
Brca1P48754 Gm15300-201ENSMUST00000122324 279 ntBASIC7.94□□□□□ -1.14
Brca1P48754 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Brca1P48754 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC7.94□□□□□ -1.14
Brca1P48754 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Brca1P48754 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.94□□□□□ -1.14
Brca1P48754 Gm6693-201ENSMUST00000189583 813 ntBASIC7.94□□□□□ -1.14
Brca1P48754 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC7.94□□□□□ -1.14
Brca1P48754 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC7.94□□□□□ -1.14
Brca1P48754 AC137902.1-201ENSMUST00000228184 102 ntBASIC7.94□□□□□ -1.14
Brca1P48754 Rbpj-208ENSMUST00000201912 5485 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Brca1P48754 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Brca1P48754 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC7.94□□□□□ -1.14
Brca1P48754 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Brca1P48754 AC155298.3-201ENSMUST00000225307 3220 ntBASIC7.94□□□□□ -1.14
Brca1P48754 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Brca1P48754 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Brca1P48754 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
Brca1P48754 Gm44669-201ENSMUST00000207774 1969 ntBASIC7.93□□□□□ -1.14
Brca1P48754 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Brca1P48754 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Brca1P48754 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Brca1P48754 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Brca1P48754 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
Brca1P48754 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Brca1P48754 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Brca1P48754 Luzp2-201ENSMUST00000082373 4901 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Brca1P48754 Add2-209ENSMUST00000204059 8182 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
Brca1P48754 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Brca1P48754 Foxn3-201ENSMUST00000046859 7705 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Brca1P48754 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
Brca1P48754 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Brca1P48754 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms