Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 AC164424.3-201ENSMUST00000220809 148 ntBASIC8.95□□□□□ -0.98
Rfx1P48377 Gm9249-201ENSMUST00000221420 578 ntBASIC8.95□□□□□ -0.98
Rfx1P48377 AC166358.8-201ENSMUST00000223288 105 ntBASIC8.95□□□□□ -0.98
Rfx1P48377 AC124739.1-201ENSMUST00000223433 148 ntBASIC8.95□□□□□ -0.98
Rfx1P48377 CT010480.3-201ENSMUST00000224712 259 ntBASIC8.95□□□□□ -0.98
Rfx1P48377 AC166822.2-201ENSMUST00000228746 275 ntBASIC8.95□□□□□ -0.98
Rfx1P48377 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rfx1P48377 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rfx1P48377 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rfx1P48377 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC8.95□□□□□ -0.98
Rfx1P48377 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rfx1P48377 Gm6195-201ENSMUST00000063059 357 ntBASIC8.95□□□□□ -0.98
Rfx1P48377 n-R5s193-201ENSMUST00000082864 109 ntBASIC8.95□□□□□ -0.98
Rfx1P48377 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Rfx1P48377 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Rfx1P48377 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Rfx1P48377 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Rfx1P48377 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC8.95□□□□□ -0.98
Rfx1P48377 AC132465.1-201ENSMUST00000219938 1307 ntBASIC8.95□□□□□ -0.98
Rfx1P48377 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Rfx1P48377 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC8.95□□□□□ -0.98
Rfx1P48377 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Rfx1P48377 Gm44436-201ENSMUST00000204200 1494 ntBASIC8.95□□□□□ -0.98
Rfx1P48377 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC8.95□□□□□ -0.98
Rfx1P48377 Gm10826-201ENSMUST00000215366 3304 ntBASIC8.95□□□□□ -0.98
Rfx1P48377 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rfx1P48377 AC107232.1-201ENSMUST00000227785 1503 ntBASIC8.95□□□□□ -0.98
Rfx1P48377 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Rfx1P48377 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Rfx1P48377 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Rfx1P48377 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rfx1P48377 Gm45786-201ENSMUST00000213021 2278 ntBASIC8.94□□□□□ -0.98
Rfx1P48377 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Rfx1P48377 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Rfx1P48377 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Rfx1P48377 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Rfx1P48377 Gm45634-201ENSMUST00000209736 1990 ntBASIC8.94□□□□□ -0.98
Rfx1P48377 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Rfx1P48377 Hist1h4f-201ENSMUST00000102971 391 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Rfx1P48377 Hist1h4h-201ENSMUST00000102972 470 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Rfx1P48377 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC8.94□□□□□ -0.98
Rfx1P48377 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Rfx1P48377 Gm14630-201ENSMUST00000118057 246 ntBASIC8.94□□□□□ -0.98
Rfx1P48377 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Rfx1P48377 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Rfx1P48377 Gm12611-201ENSMUST00000119452 1037 ntBASIC8.94□□□□□ -0.98
Rfx1P48377 Gm13440-201ENSMUST00000121665 496 ntBASIC8.94□□□□□ -0.98
Rfx1P48377 Gm14380-201ENSMUST00000122298 431 ntBASIC8.94□□□□□ -0.98
Rfx1P48377 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Rfx1P48377 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC8.94□□□□□ -0.98
Rfx1P48377 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC8.94□□□□□ -0.98
Rfx1P48377 Gm25372-201ENSMUST00000158161 255 ntBASIC8.94□□□□□ -0.98
Rfx1P48377 Gm15508-201ENSMUST00000160330 325 ntBASIC8.94□□□□□ -0.98
Rfx1P48377 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC8.94□□□□□ -0.98
Rfx1P48377 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Rfx1P48377 4933400F21Rik-201ENSMUST00000186098 1007 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Rfx1P48377 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC8.94□□□□□ -0.98
Rfx1P48377 Mark4-ps-201ENSMUST00000196140 384 ntBASIC8.94□□□□□ -0.98
Rfx1P48377 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC8.94□□□□□ -0.98
Rfx1P48377 Gm45255-201ENSMUST00000209943 811 ntBASIC8.94□□□□□ -0.98
Rfx1P48377 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Rfx1P48377 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC8.94□□□□□ -0.98
Rfx1P48377 CT485612.3-201ENSMUST00000222179 408 ntBASIC8.94□□□□□ -0.98
Rfx1P48377 AC207128.1-201ENSMUST00000225928 799 ntBASIC8.94□□□□□ -0.98
Rfx1P48377 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Rfx1P48377 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Rfx1P48377 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Rfx1P48377 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Rfx1P48377 CT025619.3-201ENSMUST00000216299 3267 ntBASIC8.94□□□□□ -0.98
Rfx1P48377 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC8.94□□□□□ -0.98
Rfx1P48377 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC8.94□□□□□ -0.98
Rfx1P48377 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Rfx1P48377 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Rfx1P48377 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC8.94□□□□□ -0.98
Rfx1P48377 AC122426.2-201ENSMUST00000216522 2947 ntBASIC8.94□□□□□ -0.98
Rfx1P48377 Gm43113-201ENSMUST00000199713 1754 ntBASIC8.94□□□□□ -0.98
Rfx1P48377 Gc-201ENSMUST00000049209 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Rfx1P48377 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Rfx1P48377 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Rfx1P48377 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Rfx1P48377 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Rfx1P48377 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rfx1P48377 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
Rfx1P48377 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Rfx1P48377 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Rfx1P48377 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rfx1P48377 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Rfx1P48377 Gm36930-201ENSMUST00000195431 2376 ntBASIC8.93□□□□□ -0.98
Rfx1P48377 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Rfx1P48377 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Rfx1P48377 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Rfx1P48377 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Rfx1P48377 Mir466f-2-201ENSMUST00000104805 94 ntBASIC8.93□□□□□ -0.98
Rfx1P48377 Gabarap-202ENSMUST00000108592 750 ntTSL 3 BASIC8.93□□□□□ -0.98
Rfx1P48377 Gm11951-201ENSMUST00000116005 431 ntBASIC8.93□□□□□ -0.98
Rfx1P48377 Gm13313-201ENSMUST00000118938 1084 ntBASIC8.93□□□□□ -0.98
Rfx1P48377 Gm13754-201ENSMUST00000120486 998 ntBASIC8.93□□□□□ -0.98
Rfx1P48377 Gm15842-201ENSMUST00000120513 618 ntBASIC8.93□□□□□ -0.98
Rfx1P48377 Gm15928-201ENSMUST00000122455 280 ntBASIC8.93□□□□□ -0.98
Rfx1P48377 Gm15347-201ENSMUST00000145372 385 ntTSL 3 BASIC8.93□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms