Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm19169-201ENSMUST00000220109 1246 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC7.71□□□□□ -1.18
Usp4P35123 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC7.71□□□□□ -1.18
Usp4P35123 AC139941.1-201ENSMUST00000221517 478 ntBASIC7.71□□□□□ -1.18
Usp4P35123 AC158536.1-201ENSMUST00000222510 256 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Gm10743-201ENSMUST00000219611 2358 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Usp4P35123 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Usp4P35123 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
Usp4P35123 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC7.71□□□□□ -1.18
Usp4P35123 Gm15394-201ENSMUST00000119656 1308 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp4P35123 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp4P35123 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC7.71□□□□□ -1.18
Usp4P35123 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Usp4P35123 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp4P35123 Gm8276-201ENSMUST00000192231 1812 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC7.71□□□□□ -1.18
Usp4P35123 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp4P35123 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Usp4P35123 Gm37965-201ENSMUST00000195304 1362 ntBASIC7.71□□□□□ -1.18
Usp4P35123 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC7.71□□□□□ -1.18
Usp4P35123 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Usp4P35123 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Usp4P35123 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Usp4P35123 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Usp4P35123 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Usp4P35123 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Usp4P35123 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Usp4P35123 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC7.7□□□□□ -1.18
Usp4P35123 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Usp4P35123 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Usp4P35123 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC7.7□□□□□ -1.18
Usp4P35123 Gm14485-201ENSMUST00000119489 493 ntBASIC7.7□□□□□ -1.18
Usp4P35123 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Usp4P35123 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Usp4P35123 Gm25372-201ENSMUST00000158161 255 ntBASIC7.7□□□□□ -1.18
Usp4P35123 Gm3611-201ENSMUST00000173687 877 ntBASIC7.7□□□□□ -1.18
Usp4P35123 Gm27972-201ENSMUST00000184720 137 ntBASIC7.7□□□□□ -1.18
Usp4P35123 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC7.7□□□□□ -1.18
Usp4P35123 Gm28335-201ENSMUST00000186204 696 ntBASIC7.7□□□□□ -1.18
Usp4P35123 Gm28558-201ENSMUST00000187373 696 ntBASIC7.7□□□□□ -1.18
Usp4P35123 Gm28734-201ENSMUST00000188104 696 ntBASIC7.7□□□□□ -1.18
Usp4P35123 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Usp4P35123 Gm18799-201ENSMUST00000189104 913 ntBASIC7.7□□□□□ -1.18
Usp4P35123 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC7.7□□□□□ -1.18
Usp4P35123 Gm28968-201ENSMUST00000190413 696 ntBASIC7.7□□□□□ -1.18
Usp4P35123 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC7.7□□□□□ -1.18
Usp4P35123 Gm28766-201ENSMUST00000191086 234 ntBASIC7.7□□□□□ -1.18
Usp4P35123 Gm38229-201ENSMUST00000191931 696 ntBASIC7.7□□□□□ -1.18
Usp4P35123 Gm38121-201ENSMUST00000193213 696 ntBASIC7.7□□□□□ -1.18
Usp4P35123 Gm37991-201ENSMUST00000194297 696 ntBASIC7.7□□□□□ -1.18
Usp4P35123 Gm38035-201ENSMUST00000194427 696 ntBASIC7.7□□□□□ -1.18
Usp4P35123 Gm38350-201ENSMUST00000194789 696 ntBASIC7.7□□□□□ -1.18
Usp4P35123 Gm37871-201ENSMUST00000194973 688 ntBASIC7.7□□□□□ -1.18
Usp4P35123 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Usp4P35123 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Usp4P35123 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC7.7□□□□□ -1.18
Usp4P35123 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC7.7□□□□□ -1.18
Usp4P35123 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC7.7□□□□□ -1.18
Usp4P35123 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC7.7□□□□□ -1.18
Usp4P35123 AC173345.3-201ENSMUST00000221245 1093 ntBASIC7.7□□□□□ -1.18
Usp4P35123 CT009711.2-202ENSMUST00000224538 973 ntBASIC7.7□□□□□ -1.18
Usp4P35123 CU024892.1-201ENSMUST00000224869 515 ntBASIC7.7□□□□□ -1.18
Usp4P35123 CT009728.1-201ENSMUST00000225228 1050 ntBASIC7.7□□□□□ -1.18
Usp4P35123 AC159205.1-201ENSMUST00000225513 1099 ntBASIC7.7□□□□□ -1.18
Usp4P35123 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC7.7□□□□□ -1.18
Usp4P35123 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Usp4P35123 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Usp4P35123 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Usp4P35123 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Usp4P35123 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Usp4P35123 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Usp4P35123 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Usp4P35123 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC7.7□□□□□ -1.18
Usp4P35123 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Usp4P35123 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Usp4P35123 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Usp4P35123 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Usp4P35123 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Usp4P35123 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Usp4P35123 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Usp4P35123 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC7.69□□□□□ -1.18
Usp4P35123 Gm18300-201ENSMUST00000192792 1406 ntBASIC7.69□□□□□ -1.18
Usp4P35123 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Usp4P35123 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Usp4P35123 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Usp4P35123 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Usp4P35123 Gm5702-201ENSMUST00000185629 2469 ntBASIC7.69□□□□□ -1.18
Usp4P35123 Gm42653-201ENSMUST00000200644 2839 ntBASIC7.69□□□□□ -1.18
Usp4P35123 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Usp4P35123 Gm6640-201ENSMUST00000120629 1587 ntBASIC7.69□□□□□ -1.18
Usp4P35123 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Usp4P35123 Gm25725-201ENSMUST00000104528 130 ntBASIC7.69□□□□□ -1.18
Usp4P35123 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Usp4P35123 Gm15054-201ENSMUST00000117393 281 ntBASIC7.69□□□□□ -1.18
Usp4P35123 Gm8624-201ENSMUST00000118083 432 ntBASIC7.69□□□□□ -1.18
Usp4P35123 Gm13506-201ENSMUST00000120391 1083 ntBASIC7.69□□□□□ -1.18
Usp4P35123 Gm14587-201ENSMUST00000121714 658 ntBASIC7.69□□□□□ -1.18
Usp4P35123 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms