Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col2a1P28481 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col2a1P28481 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Col2a1P28481 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col2a1P28481 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Col2a1P28481 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC8.02□□□□□ -1.13
Col2a1P28481 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC8.02□□□□□ -1.13
Col2a1P28481 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col2a1P28481 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col2a1P28481 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col2a1P28481 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col2a1P28481 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col2a1P28481 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Col2a1P28481 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC8.02□□□□□ -1.13
Col2a1P28481 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC8.02□□□□□ -1.13
Col2a1P28481 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col2a1P28481 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col2a1P28481 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col2a1P28481 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Col2a1P28481 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col2a1P28481 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC8.01□□□□□ -1.13
Col2a1P28481 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Col2a1P28481 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC8.01□□□□□ -1.13
Col2a1P28481 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Col2a1P28481 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Col2a1P28481 Gm24790-201ENSMUST00000104285 132 ntBASIC8.01□□□□□ -1.13
Col2a1P28481 Gm14116-201ENSMUST00000117733 805 ntBASIC8.01□□□□□ -1.13
Col2a1P28481 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Col2a1P28481 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Col2a1P28481 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC8.01□□□□□ -1.13
Col2a1P28481 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Col2a1P28481 Gm23756-201ENSMUST00000157582 114 ntBASIC8.01□□□□□ -1.13
Col2a1P28481 Gm25435-201ENSMUST00000158277 267 ntBASIC8.01□□□□□ -1.13
Col2a1P28481 Gm25717-201ENSMUST00000158631 353 ntBASIC8.01□□□□□ -1.13
Col2a1P28481 Mir199b-201ENSMUST00000175066 110 ntBASIC8.01□□□□□ -1.13
Col2a1P28481 Gm37439-201ENSMUST00000193150 856 ntBASIC8.01□□□□□ -1.13
Col2a1P28481 Gm38840-201ENSMUST00000204716 843 ntBASIC8.01□□□□□ -1.13
Col2a1P28481 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC8.01□□□□□ -1.13
Col2a1P28481 Gm45693-201ENSMUST00000211391 1157 ntBASIC8.01□□□□□ -1.13
Col2a1P28481 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Col2a1P28481 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Col2a1P28481 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col2a1P28481 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Col2a1P28481 Gm26130-201ENSMUST00000083171 138 ntBASIC8.01□□□□□ -1.13
Col2a1P28481 Gm29486-201ENSMUST00000088648 372 ntBASIC8.01□□□□□ -1.13
Col2a1P28481 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Col2a1P28481 Gm37785-201ENSMUST00000195783 2408 ntBASIC8.01□□□□□ -1.13
Col2a1P28481 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col2a1P28481 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Col2a1P28481 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Col2a1P28481 AC124516.1-201ENSMUST00000221845 3544 ntBASIC8.01□□□□□ -1.13
Col2a1P28481 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col2a1P28481 Dmxl2-201ENSMUST00000118163 10614 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
Col2a1P28481 Daam1-202ENSMUST00000221317 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Col2a1P28481 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
Col2a1P28481 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC8.01□□□□□ -1.13
Col2a1P28481 Gm44669-201ENSMUST00000207774 1969 ntBASIC8.01□□□□□ -1.13
Col2a1P28481 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Col2a1P28481 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Col2a1P28481 Ctnnd1-222ENSMUST00000111696 6281 ntTSL 5 BASIC8.01□□□□□ -1.13
Col2a1P28481 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Col2a1P28481 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col2a1P28481 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC8□□□□□ -1.13
Col2a1P28481 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
Col2a1P28481 Gm12653-201ENSMUST00000117778 561 ntBASIC8□□□□□ -1.13
Col2a1P28481 Gm12713-201ENSMUST00000118404 764 ntBASIC8□□□□□ -1.13
Col2a1P28481 Gm5601-201ENSMUST00000118909 972 ntBASIC8□□□□□ -1.13
Col2a1P28481 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC8□□□□□ -1.13
Col2a1P28481 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC8□□□□□ -1.13
Col2a1P28481 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC8□□□□□ -1.13
Col2a1P28481 Gm23968-201ENSMUST00000175047 125 ntBASIC8□□□□□ -1.13
Col2a1P28481 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC8□□□□□ -1.13
Col2a1P28481 Gm27972-201ENSMUST00000184720 137 ntBASIC8□□□□□ -1.13
Col2a1P28481 AC099760.1-201ENSMUST00000196300 153 ntBASIC8□□□□□ -1.13
Col2a1P28481 Gm42708-201ENSMUST00000196332 905 ntBASIC8□□□□□ -1.13
Col2a1P28481 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC8□□□□□ -1.13
Col2a1P28481 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC8□□□□□ -1.13
Col2a1P28481 Gm45739-201ENSMUST00000213094 388 ntBASIC8□□□□□ -1.13
Col2a1P28481 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC8□□□□□ -1.13
Col2a1P28481 AC156016.2-201ENSMUST00000228200 525 ntBASIC8□□□□□ -1.13
Col2a1P28481 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC8□□□□□ -1.13
Col2a1P28481 Gm25587-201ENSMUST00000082498 166 ntBASIC8□□□□□ -1.13
Col2a1P28481 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC8□□□□□ -1.13
Col2a1P28481 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col2a1P28481 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Col2a1P28481 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC8□□□□□ -1.13
Col2a1P28481 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC8□□□□□ -1.13
Col2a1P28481 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Col2a1P28481 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Col2a1P28481 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col2a1P28481 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Col2a1P28481 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col2a1P28481 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Col2a1P28481 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Col2a1P28481 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Col2a1P28481 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC8□□□□□ -1.13
Col2a1P28481 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Col2a1P28481 AC123832.1-201ENSMUST00000214120 2371 ntBASIC8□□□□□ -1.13
Col2a1P28481 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC8□□□□□ -1.13
Col2a1P28481 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms