Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm45712-201ENSMUST00000212417 335 ntBASIC5.67□□□□□ -1.5
Sdc1P18828 AC154307.1-201ENSMUST00000214799 90 ntBASIC5.67□□□□□ -1.5
Sdc1P18828 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC5.67□□□□□ -1.5
Sdc1P18828 Gm46231-201ENSMUST00000220152 314 ntBASIC5.67□□□□□ -1.5
Sdc1P18828 AC161252.2-201ENSMUST00000224978 374 ntBASIC5.67□□□□□ -1.5
Sdc1P18828 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Sdc1P18828 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Sdc1P18828 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Sdc1P18828 Gm8394-201ENSMUST00000079684 952 ntBASIC5.67□□□□□ -1.5
Sdc1P18828 Olfr1283-201ENSMUST00000090328 1026 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Sdc1P18828 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sdc1P18828 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sdc1P18828 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sdc1P18828 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sdc1P18828 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Sdc1P18828 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC5.67□□□□□ -1.5
Sdc1P18828 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sdc1P18828 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sdc1P18828 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sdc1P18828 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Sdc1P18828 AC155298.1-201ENSMUST00000225350 3250 ntBASIC5.66□□□□□ -1.5
Sdc1P18828 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sdc1P18828 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Sdc1P18828 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sdc1P18828 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sdc1P18828 Gm44584-201ENSMUST00000208395 2880 ntBASIC5.66□□□□□ -1.5
Sdc1P18828 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sdc1P18828 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sdc1P18828 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC5.66□□□□□ -1.5
Sdc1P18828 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sdc1P18828 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC5.66□□□□□ -1.5
Sdc1P18828 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sdc1P18828 Gm23129-201ENSMUST00000104259 132 ntBASIC5.66□□□□□ -1.5
Sdc1P18828 Ccl20-202ENSMUST00000113437 794 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sdc1P18828 Gm13573-201ENSMUST00000116410 631 ntBASIC5.66□□□□□ -1.5
Sdc1P18828 Gm11893-201ENSMUST00000117829 491 ntBASIC5.66□□□□□ -1.5
Sdc1P18828 Gm13700-201ENSMUST00000118624 1128 ntBASIC5.66□□□□□ -1.5
Sdc1P18828 Gm11907-201ENSMUST00000118918 1007 ntBASIC5.66□□□□□ -1.5
Sdc1P18828 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC5.66□□□□□ -1.5
Sdc1P18828 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sdc1P18828 Gm13012-202ENSMUST00000155349 849 ntTSL 2 BASIC5.66□□□□□ -1.5
Sdc1P18828 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sdc1P18828 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sdc1P18828 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sdc1P18828 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sdc1P18828 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC5.66□□□□□ -1.5
Sdc1P18828 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC5.66□□□□□ -1.5
Sdc1P18828 Gm5190-201ENSMUST00000192434 357 ntBASIC5.66□□□□□ -1.5
Sdc1P18828 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC5.66□□□□□ -1.5
Sdc1P18828 Gm30275-201ENSMUST00000197620 498 ntTSL 2 BASIC5.66□□□□□ -1.5
Sdc1P18828 Gm42952-204ENSMUST00000198572 408 ntTSL 3 BASIC5.66□□□□□ -1.5
Sdc1P18828 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC5.66□□□□□ -1.5
Sdc1P18828 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC5.66□□□□□ -1.5
Sdc1P18828 Gm20274-201ENSMUST00000206967 584 ntBASIC5.66□□□□□ -1.5
Sdc1P18828 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sdc1P18828 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sdc1P18828 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sdc1P18828 Gm33778-201ENSMUST00000216884 704 ntBASIC5.66□□□□□ -1.5
Sdc1P18828 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC5.66□□□□□ -1.5
Sdc1P18828 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sdc1P18828 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC5.66□□□□□ -1.5
Sdc1P18828 Gm18618-201ENSMUST00000222211 473 ntBASIC5.66□□□□□ -1.5
Sdc1P18828 CT030184.2-201ENSMUST00000223064 263 ntBASIC5.66□□□□□ -1.5
Sdc1P18828 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC5.66□□□□□ -1.5
Sdc1P18828 CT009550.1-201ENSMUST00000225750 864 ntBASIC5.66□□□□□ -1.5
Sdc1P18828 AC156790.1-201ENSMUST00000226572 559 ntBASIC5.66□□□□□ -1.5
Sdc1P18828 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Sdc1P18828 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sdc1P18828 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sdc1P18828 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Sdc1P18828 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Sdc1P18828 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC5.66□□□□□ -1.5
Sdc1P18828 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sdc1P18828 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sdc1P18828 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Sdc1P18828 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sdc1P18828 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sdc1P18828 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sdc1P18828 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Sdc1P18828 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Sdc1P18828 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Sdc1P18828 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sdc1P18828 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sdc1P18828 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sdc1P18828 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Sdc1P18828 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.5
Sdc1P18828 Robo2-210ENSMUST00000226478 8059 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
Sdc1P18828 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sdc1P18828 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
Sdc1P18828 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sdc1P18828 Gm43557-201ENSMUST00000197100 2370 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sdc1P18828 Gm9030-201ENSMUST00000218405 2410 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 Gm9029-201ENSMUST00000219232 2410 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 Gm37106-201ENSMUST00000193760 1532 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sdc1P18828 Gm38178-201ENSMUST00000194502 2471 ntBASIC5.65□□□□□ -1.5
Sdc1P18828 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sdc1P18828 Gps2-203ENSMUST00000116358 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms