Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
Cdx1P18111 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Gria3-209ENSMUST00000165288 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 AC130661.1-201ENSMUST00000218248 1680 ntBASIC5.84□□□□□ -1.47
Cdx1P18111 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cdx1P18111 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Cdx1P18111 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.84□□□□□ -1.48
Cdx1P18111 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC5.84□□□□□ -1.48
Cdx1P18111 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Cdx1P18111 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
Cdx1P18111 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Cdx1P18111 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Cdx1P18111 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 Gm37510-201ENSMUST00000194151 4762 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
Cdx1P18111 Gm38120-201ENSMUST00000195506 4642 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Cdx1P18111 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Cdx1P18111 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Cdx1P18111 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Xlr5b-202ENSMUST00000114518 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Xlr5a-204ENSMUST00000179600 1650 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Cdx1P18111 Tespa1-201ENSMUST00000042586 1663 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Xlr5a-201ENSMUST00000078574 1650 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Gm23484-201ENSMUST00000104178 131 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Gm6490-201ENSMUST00000111862 461 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC5.83□□□□□ -1.48
Cdx1P18111 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC5.83□□□□□ -1.48
Cdx1P18111 Gm14053-201ENSMUST00000121662 470 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 Gm14380-201ENSMUST00000122298 431 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC5.83□□□□□ -1.48
Cdx1P18111 Gm11722-201ENSMUST00000138702 534 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Gm24647-201ENSMUST00000157112 113 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 Gm23533-201ENSMUST00000157540 245 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 Gm26182-201ENSMUST00000157688 116 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Gm17188-202ENSMUST00000165178 680 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Cdx1P18111 Gm20549-201ENSMUST00000174804 429 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 Mir3078-201ENSMUST00000175231 87 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Gm27019-201ENSMUST00000183056 404 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 Gm27972-201ENSMUST00000184720 137 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 Gm38078-201ENSMUST00000192771 392 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Cdx1P18111 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC5.83□□□□□ -1.48
Cdx1P18111 Gm43743-201ENSMUST00000197898 697 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 Gm18131-201ENSMUST00000199241 449 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 Gm45259-201ENSMUST00000209217 1006 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 AC102582.1-201ENSMUST00000215376 378 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC5.83□□□□□ -1.48
Cdx1P18111 CT030170.6-202ENSMUST00000223186 544 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Cdx1P18111 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Gm10155-201ENSMUST00000084598 483 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Cdx1P18111 Rapgef4-202ENSMUST00000090826 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Cdx1P18111 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC5.83□□□□□ -1.48
Cdx1P18111 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Gm16123-201ENSMUST00000118647 1517 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 Gm42520-201ENSMUST00000199642 1502 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Cdx1P18111 Gm18957-201ENSMUST00000197623 1813 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
Cdx1P18111 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Cdx1P18111 Gm28813-201ENSMUST00000186293 1497 ntTSL 5 BASIC5.83□□□□□ -1.48
Cdx1P18111 Gm29324-202ENSMUST00000188242 1497 ntTSL 5 BASIC5.83□□□□□ -1.48
Cdx1P18111 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Cdx1P18111 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Gm42820-201ENSMUST00000200084 3063 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC5.83□□□□□ -1.48
Cdx1P18111 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdx1P18111 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cdx1P18111 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdx1P18111 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC5.82□□□□□ -1.48
Cdx1P18111 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms