Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Gm43554-201ENSMUST00000199987 186 ntBASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Gm6063-201ENSMUST00000206958 485 ntBASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Gm44683-201ENSMUST00000209088 484 ntBASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 AC122858.1-201ENSMUST00000226212 433 ntBASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 AC122858.3-201ENSMUST00000226341 740 ntBASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Gm17165-201ENSMUST00000096155 493 ntBASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Gm37274-201ENSMUST00000192167 1682 ntBASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Gm44101-201ENSMUST00000203951 2221 ntBASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Gm11366-201ENSMUST00000119279 429 ntBASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Gm28385-201ENSMUST00000185671 292 ntBASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Gm17824-201ENSMUST00000197690 805 ntBASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 AC123665.6-201ENSMUST00000228568 538 ntBASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 H2-M1-201ENSMUST00000041662 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 B930095G15Rik-201ENSMUST00000130256 4715 ntTSL 2 BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Gm37902-201ENSMUST00000192839 1683 ntBASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Atg4a-ps-201ENSMUST00000117271 2115 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Col6a3E9PWQ3 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Gm8501-201ENSMUST00000117684 432 ntBASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Gm25065-201ENSMUST00000177914 132 ntBASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Gm25891-201ENSMUST00000180050 132 ntBASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Mir219c-201ENSMUST00000199860 60 ntBASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Bmf-201ENSMUST00000090219 4642 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Gm44996-201ENSMUST00000208787 2980 ntBASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Gm13462-201ENSMUST00000121472 961 ntBASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Gm22789-201ENSMUST00000157884 130 ntBASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Gm17217-201ENSMUST00000166613 469 ntBASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Gm9237-201ENSMUST00000221499 548 ntBASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Gm42661-201ENSMUST00000202364 1442 ntBASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Gm42561-201ENSMUST00000202563 1442 ntBASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Elmo1-201ENSMUST00000072519 5464 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Prdm2-201ENSMUST00000105778 7304 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Gm20486-201ENSMUST00000101544 128 ntBASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Gm8761-201ENSMUST00000121507 955 ntBASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 AC156037.1-201ENSMUST00000221133 127 ntBASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 AC125543.3-201ENSMUST00000221991 126 ntBASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Mbnl2-203ENSMUST00000226800 3328 ntBASIC6.79□□□□□ -1.32
Col6a3E9PWQ3 Gm42636-201ENSMUST00000197174 2239 ntBASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Stxbp5-202ENSMUST00000125200 3300 ntTSL 5 BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Col6a3E9PWQ3 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 194.1 ms