Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Gm42772-201ENSMUST00000199945 3041 ntBASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Gm37347-201ENSMUST00000193969 3071 ntBASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Gm28649-201ENSMUST00000189153 1581 ntBASIC8.03□□□□□ -1.12
Smc1aQ9CU62 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Gm14904-201ENSMUST00000117067 335 ntBASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Gm14279-201ENSMUST00000117142 332 ntBASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Gm13414-201ENSMUST00000117516 727 ntBASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Gm10243-201ENSMUST00000117571 333 ntBASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Gm19211-201ENSMUST00000200251 1206 ntBASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Gm2505-201ENSMUST00000200413 825 ntBASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Gm45506-201ENSMUST00000211620 280 ntBASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Gm18860-201ENSMUST00000212029 764 ntBASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 AC163296.1-202ENSMUST00000218395 661 ntBASIC8.03□□□□□ -1.12
Smc1aQ9CU62 AC122539.1-201ENSMUST00000219925 329 ntBASIC8.03□□□□□ -1.12
Smc1aQ9CU62 AC163296.1-201ENSMUST00000220004 1266 ntBASIC8.03□□□□□ -1.12
Smc1aQ9CU62 AC106830.2-201ENSMUST00000226624 943 ntBASIC8.03□□□□□ -1.12
Smc1aQ9CU62 AC131033.1-201ENSMUST00000228223 279 ntBASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Gm10247-201ENSMUST00000090395 333 ntBASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Gm43429-201ENSMUST00000197889 2251 ntBASIC8.03□□□□□ -1.12
Smc1aQ9CU62 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC8.02□□□□□ -1.12
Smc1aQ9CU62 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Smc1aQ9CU62 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Smc1aQ9CU62 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Gm29670-201ENSMUST00000190228 2491 ntBASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Smc1aQ9CU62 n-R5s172-201ENSMUST00000104508 114 ntBASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Gm14826-201ENSMUST00000121284 901 ntBASIC8.02□□□□□ -1.13
Smc1aQ9CU62 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Gm24824-201ENSMUST00000175097 78 ntBASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Gm7481-201ENSMUST00000182020 995 ntBASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Gm27373-201ENSMUST00000184017 184 ntBASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC8.02□□□□□ -1.13
Smc1aQ9CU62 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Gm5050-201ENSMUST00000197164 775 ntBASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Gm42424-201ENSMUST00000198319 376 ntBASIC8.02□□□□□ -1.13
Smc1aQ9CU62 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Smc1aQ9CU62 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Gm7986-201ENSMUST00000221336 551 ntBASIC8.02□□□□□ -1.13
Smc1aQ9CU62 AC101205.1-201ENSMUST00000227916 907 ntBASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Smc1aQ9CU62 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Gm22865-201ENSMUST00000083949 214 ntBASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Gm43279-201ENSMUST00000202376 2512 ntBASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Gm38009-201ENSMUST00000194884 3341 ntBASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Smc1aQ9CU62 AC120347.2-201ENSMUST00000222224 2015 ntBASIC8.02□□□□□ -1.13
Smc1aQ9CU62 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Smc1aQ9CU62 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms