Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm44234-201ENSMUST00000204246 900 ntBASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 AL929555.1-201ENSMUST00000215283 509 ntBASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 AC153561.1-201ENSMUST00000215943 469 ntBASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Gm18892-201ENSMUST00000217628 881 ntBASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Gm5087-204ENSMUST00000225820 645 ntBASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 AC125087.1-201ENSMUST00000227552 514 ntBASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Gm24613-201ENSMUST00000083266 130 ntBASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Olfr806-203ENSMUST00000215142 3108 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Gm16497-201ENSMUST00000222024 2842 ntTSL 2 BASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Wdpcp-201ENSMUST00000020568 2792 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Frk-202ENSMUST00000170771 3406 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Gm37949-201ENSMUST00000192808 2091 ntBASIC7.34□□□□□ -1.23
Nkx6-1Q99MA9 Gm42671-201ENSMUST00000198013 1604 ntBASIC7.34□□□□□ -1.24
Nkx6-1Q99MA9 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.24
Nkx6-1Q99MA9 Olfr1315-ps1-203ENSMUST00000217078 1559 ntAPPRIS P5 TSL 5 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Galk2-201ENSMUST00000028636 2605 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm26719-201ENSMUST00000180395 3220 ntTSL 5 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Atg4a-ps-201ENSMUST00000117271 2115 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 AC154227.2-201ENSMUST00000228677 2101 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Olfr958-202ENSMUST00000215505 3514 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Chid1-203ENSMUST00000118694 3910 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Tmem106b-201ENSMUST00000031556 6002 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm13750-201ENSMUST00000117621 465 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm12988-201ENSMUST00000119054 478 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm12262-201ENSMUST00000119915 305 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm15481-201ENSMUST00000120264 539 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm25660-201ENSMUST00000158470 104 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm10012-202ENSMUST00000170379 372 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm6838-201ENSMUST00000172851 582 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm5698-201ENSMUST00000178317 724 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm7481-201ENSMUST00000182020 995 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Mir6409-201ENSMUST00000184957 92 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm28384-201ENSMUST00000189079 463 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Igkv4-77-201ENSMUST00000199410 352 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm43849-201ENSMUST00000201086 215 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm6064-201ENSMUST00000203999 454 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm18268-201ENSMUST00000208445 943 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm45240-201ENSMUST00000211437 674 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 AC154450.1-201ENSMUST00000220911 485 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 CT485612.1-201ENSMUST00000222555 382 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 AC123533.2-201ENSMUST00000228176 375 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm44423-201ENSMUST00000203746 3158 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Gm10069-201ENSMUST00000144745 3694 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Slc7a2-202ENSMUST00000098816 3677 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Olfr654-203ENSMUST00000213984 3063 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Nkx6-1Q99MA9 Wdr76-202ENSMUST00000099473 2315 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms