Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 AC152394.1-201ENSMUST00000227360 1086 ntBASIC9.25□□□□□ -0.93
Col16a1Q8BLX7 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Col16a1Q8BLX7 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col16a1Q8BLX7 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Col16a1Q8BLX7 AC153955.4-201ENSMUST00000217069 2752 ntBASIC9.25□□□□□ -0.93
Col16a1Q8BLX7 Stag1-201ENSMUST00000041418 5909 ntTSL 5 BASIC9.25□□□□□ -0.93
Col16a1Q8BLX7 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Col16a1Q8BLX7 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col16a1Q8BLX7 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col16a1Q8BLX7 Dusp3-201ENSMUST00000003612 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Col16a1Q8BLX7 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Col16a1Q8BLX7 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Gm25904-201ENSMUST00000158491 143 ntBASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Gm20620-201ENSMUST00000177528 168 ntBASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Gm26557-201ENSMUST00000180756 493 ntBASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Mir6973b-201ENSMUST00000184185 80 ntBASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Mir7653-201ENSMUST00000184358 61 ntBASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Gm7266-201ENSMUST00000187999 405 ntBASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Gm8241-201ENSMUST00000189286 816 ntBASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Gm37809-201ENSMUST00000195050 931 ntBASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Gm5055-201ENSMUST00000215697 581 ntBASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 AC138329.1-201ENSMUST00000225040 471 ntBASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 AC102139.1-201ENSMUST00000227000 251 ntBASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Cntnap4-202ENSMUST00000118171 4860 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Pcdhb11-201ENSMUST00000053073 4419 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Arhgef9-207ENSMUST00000113885 4578 ntTSL 5 BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 AC155710.1-201ENSMUST00000219913 1353 ntBASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Cwc22-201ENSMUST00000065889 3471 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Gm43497-201ENSMUST00000201137 2316 ntBASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Etl4-205ENSMUST00000114607 3055 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Gm14695-201ENSMUST00000121721 282 ntBASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Gm11581-201ENSMUST00000122024 763 ntBASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Gm8837-201ENSMUST00000161037 1107 ntBASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Gm5154-201ENSMUST00000203971 399 ntBASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Gm5831-201ENSMUST00000216016 1209 ntBASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 CT009711.4-201ENSMUST00000225685 198 ntBASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Adgrl2-204ENSMUST00000195988 4541 ntTSL 5 BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Gm37706-201ENSMUST00000195379 2765 ntBASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col16a1Q8BLX7 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Gm45297-201ENSMUST00000209893 3483 ntBASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Rnf222-201ENSMUST00000065213 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Olfr63-203ENSMUST00000217023 7023 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Gm44950-201ENSMUST00000206403 2296 ntBASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Spag9-205ENSMUST00000103168 6840 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 AC159193.3-201ENSMUST00000221902 2622 ntBASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Kantr-207ENSMUST00000195280 4212 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Setd7-201ENSMUST00000037141 7411 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Prdm15-203ENSMUST00000121584 6194 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Gm14018-201ENSMUST00000119042 455 ntBASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Gm29470-201ENSMUST00000188007 696 ntBASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Gm36935-201ENSMUST00000192526 292 ntBASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Gm17908-201ENSMUST00000205552 1256 ntBASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Gm4803-201ENSMUST00000218729 1279 ntBASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 CT009738.1-201ENSMUST00000219031 809 ntBASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 AC163684.1-201ENSMUST00000223766 927 ntBASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 AC154806.1-203ENSMUST00000227370 1032 ntBASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Gm25133-201ENSMUST00000082647 130 ntBASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC9.23□□□□□ -0.93
Col16a1Q8BLX7 Slco6b1-202ENSMUST00000178359 1778 ntBASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms