Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
HttP42859 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
HttP42859 Gm5073-201ENSMUST00000118222 820 ntBASIC7.23□□□□□ -1.25
HttP42859 Gm11804-201ENSMUST00000121663 468 ntBASIC7.23□□□□□ -1.25
HttP42859 Gm26738-201ENSMUST00000181312 601 ntBASIC7.23□□□□□ -1.25
HttP42859 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
HttP42859 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC7.23□□□□□ -1.25
HttP42859 Gm19033-201ENSMUST00000208516 964 ntBASIC7.23□□□□□ -1.25
HttP42859 AC122459.2-201ENSMUST00000227099 638 ntBASIC7.23□□□□□ -1.25
HttP42859 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
HttP42859 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
HttP42859 Tbx5-201ENSMUST00000018407 3942 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HttP42859 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
HttP42859 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
HttP42859 Pcsk2-201ENSMUST00000028905 4723 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HttP42859 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
HttP42859 Slco4c1-201ENSMUST00000071985 4908 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HttP42859 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
HttP42859 Gm12193-201ENSMUST00000117250 379 ntBASIC7.23□□□□□ -1.25
HttP42859 Gm11481-201ENSMUST00000120069 255 ntBASIC7.23□□□□□ -1.25
HttP42859 Gm11581-201ENSMUST00000122024 763 ntBASIC7.23□□□□□ -1.25
HttP42859 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
HttP42859 Gm17217-201ENSMUST00000166613 469 ntBASIC7.23□□□□□ -1.25
HttP42859 Gm27409-201ENSMUST00000184727 80 ntBASIC7.23□□□□□ -1.25
HttP42859 Gm5692-201ENSMUST00000187254 1057 ntBASIC7.23□□□□□ -1.25
HttP42859 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC7.23□□□□□ -1.25
HttP42859 AC134537.2-201ENSMUST00000217770 575 ntBASIC7.23□□□□□ -1.25
HttP42859 AC168062.1-201ENSMUST00000228048 769 ntBASIC7.23□□□□□ -1.25
HttP42859 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HttP42859 Atp6v1a-202ENSMUST00000114666 4234 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HttP42859 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HttP42859 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
HttP42859 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
HttP42859 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HttP42859 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HttP42859 Adgrd1-201ENSMUST00000056617 5163 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
HttP42859 Gm10555-201ENSMUST00000193178 1791 ntBASIC7.23□□□□□ -1.25
HttP42859 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
HttP42859 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
HttP42859 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
HttP42859 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
HttP42859 Gm24473-201ENSMUST00000104483 131 ntBASIC7.23□□□□□ -1.25
HttP42859 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
HttP42859 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
HttP42859 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
HttP42859 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
HttP42859 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
HttP42859 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC7.23□□□□□ -1.25
HttP42859 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC7.23□□□□□ -1.25
HttP42859 Olfr809-203ENSMUST00000218237 1100 ntBASIC7.23□□□□□ -1.25
HttP42859 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC7.23□□□□□ -1.25
HttP42859 AC166358.3-201ENSMUST00000221456 181 ntBASIC7.23□□□□□ -1.25
HttP42859 AC125543.4-201ENSMUST00000223385 117 ntBASIC7.23□□□□□ -1.25
HttP42859 CT030645.2-201ENSMUST00000224321 1012 ntBASIC7.23□□□□□ -1.25
HttP42859 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
HttP42859 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC7.23□□□□□ -1.25
HttP42859 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
HttP42859 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
HttP42859 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
HttP42859 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HttP42859 Slc5a6-201ENSMUST00000080431 3218 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HttP42859 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
HttP42859 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
HttP42859 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
HttP42859 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
HttP42859 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
HttP42859 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HttP42859 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
HttP42859 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HttP42859 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HttP42859 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
HttP42859 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
HttP42859 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC7.22□□□□□ -1.25
HttP42859 Gm12317-201ENSMUST00000122307 319 ntBASIC7.22□□□□□ -1.25
HttP42859 Gm23259-201ENSMUST00000158318 303 ntBASIC7.22□□□□□ -1.25
HttP42859 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
HttP42859 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
HttP42859 AC123832.2-201ENSMUST00000215151 129 ntBASIC7.22□□□□□ -1.25
HttP42859 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
HttP42859 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
HttP42859 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
HttP42859 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
HttP42859 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
HttP42859 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
HttP42859 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
HttP42859 Gm10650-202ENSMUST00000196581 1969 ntBASIC7.22□□□□□ -1.25
HttP42859 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
HttP42859 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
HttP42859 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
HttP42859 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
HttP42859 Rtel1-204ENSMUST00000108814 4322 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
HttP42859 Epn2-212ENSMUST00000178202 4317 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
HttP42859 Gm42763-201ENSMUST00000199595 2087 ntBASIC7.22□□□□□ -1.25
HttP42859 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC7.22□□□□□ -1.25
HttP42859 Gm27219-201ENSMUST00000184633 742 ntBASIC7.22□□□□□ -1.25
HttP42859 Gm18728-201ENSMUST00000186155 753 ntBASIC7.22□□□□□ -1.25
HttP42859 Gm6558-202ENSMUST00000192046 180 ntTSL 5 BASIC7.22□□□□□ -1.25
HttP42859 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC7.22□□□□□ -1.25
HttP42859 Gm18469-201ENSMUST00000208850 439 ntBASIC7.22□□□□□ -1.25
HttP42859 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms