Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Col1a1P11087 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col1a1P11087 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC8.33□□□□□ -1.08
Col1a1P11087 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col1a1P11087 Blm-202ENSMUST00000170315 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col1a1P11087 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col1a1P11087 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col1a1P11087 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC8.33□□□□□ -1.08
Col1a1P11087 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col1a1P11087 Gm43519-201ENSMUST00000197239 1872 ntBASIC8.33□□□□□ -1.08
Col1a1P11087 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col1a1P11087 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col1a1P11087 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC8.33□□□□□ -1.08
Col1a1P11087 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Col1a1P11087 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col1a1P11087 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col1a1P11087 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Col1a1P11087 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col1a1P11087 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Col1a1P11087 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Col1a1P11087 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col1a1P11087 Vps8-206ENSMUST00000118923 4838 ntTSL 5 BASIC8.33□□□□□ -1.08
Col1a1P11087 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Col1a1P11087 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC8.33□□□□□ -1.08
Col1a1P11087 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC8.32□□□□□ -1.08
Col1a1P11087 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col1a1P11087 Gm12518-201ENSMUST00000122075 779 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC8.32□□□□□ -1.08
Col1a1P11087 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC8.32□□□□□ -1.08
Col1a1P11087 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC8.32□□□□□ -1.08
Col1a1P11087 Gm27295-201ENSMUST00000184264 153 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 Gm43116-201ENSMUST00000199789 195 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col1a1P11087 Gm17908-201ENSMUST00000205552 1256 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 Gm44902-201ENSMUST00000206177 805 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 Gm2774-201ENSMUST00000213650 1165 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 AL929555.1-201ENSMUST00000215283 509 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 Gm19340-201ENSMUST00000221995 345 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 CT009713.5-201ENSMUST00000224508 909 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 CT025579.4-201ENSMUST00000224598 627 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Col1a1P11087 Gm22865-201ENSMUST00000083949 214 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col1a1P11087 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col1a1P11087 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC8.32□□□□□ -1.08
Col1a1P11087 Gm44101-201ENSMUST00000203951 2221 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC8.32□□□□□ -1.08
Col1a1P11087 Gm38277-201ENSMUST00000195172 1367 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col1a1P11087 AC155298.3-201ENSMUST00000225307 3220 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col1a1P11087 Thada-201ENSMUST00000047524 7884 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col1a1P11087 Gm17841-201ENSMUST00000210711 2425 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 Gm26575-201ENSMUST00000181714 2232 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
Col1a1P11087 n-R5s178-201ENSMUST00000104249 114 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col1a1P11087 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col1a1P11087 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col1a1P11087 Gm25904-201ENSMUST00000158491 143 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 Gm27998-201ENSMUST00000184902 361 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col1a1P11087 Gm8190-201ENSMUST00000199603 586 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col1a1P11087 AC161374.1-201ENSMUST00000224191 794 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 AC154806.5-204ENSMUST00000228900 867 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 Snora21-201ENSMUST00000082967 137 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 Gm16020-201ENSMUST00000084281 210 ntBASIC8.32□□□□□ -1.08
Col1a1P11087 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Col1a1P11087 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col1a1P11087 Gm44194-201ENSMUST00000204222 3229 ntBASIC8.31□□□□□ -1.08
Col1a1P11087 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC8.31□□□□□ -1.08
Col1a1P11087 Rel-201ENSMUST00000102864 7466 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col1a1P11087 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col1a1P11087 Dock9-206ENSMUST00000212181 7368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col1a1P11087 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col1a1P11087 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Col1a1P11087 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col1a1P11087 Dapp1-201ENSMUST00000029806 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col1a1P11087 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col1a1P11087 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col1a1P11087 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Col1a1P11087 AC115760.1-201ENSMUST00000225160 1327 ntBASIC8.31□□□□□ -1.08
Col1a1P11087 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Col1a1P11087 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col1a1P11087 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC8.31□□□□□ -1.08
Col1a1P11087 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col1a1P11087 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
Col1a1P11087 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col1a1P11087 Gm43128-201ENSMUST00000202212 1621 ntBASIC8.31□□□□□ -1.08
Col1a1P11087 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col1a1P11087 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col1a1P11087 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col1a1P11087 Kmt2a-201ENSMUST00000002095 16461 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Col1a1P11087 Gm6493-201ENSMUST00000159889 1786 ntBASIC8.31□□□□□ -1.08
Col1a1P11087 Gm23311-201ENSMUST00000104152 134 ntBASIC8.31□□□□□ -1.08
Col1a1P11087 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms