Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cfap99A0A140LIX9 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cfap99A0A140LIX9 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 AC159195.2-201ENSMUST00000223670 3757 ntBASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Gm5843-201ENSMUST00000121631 476 ntBASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Gm3208-201ENSMUST00000168281 427 ntBASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Mir6241-201ENSMUST00000184225 103 ntBASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Gm37383-201ENSMUST00000191750 745 ntBASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Gm42782-201ENSMUST00000197286 522 ntBASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Gm44471-201ENSMUST00000197963 100 ntBASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Gm45782-201ENSMUST00000212670 366 ntBASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Gm26945-201ENSMUST00000183191 2011 ntBASIC8.53□□□□□ -1.04
Cfap99A0A140LIX9 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC8.52□□□□□ -1.04
Cfap99A0A140LIX9 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Cfap99A0A140LIX9 Klf5-202ENSMUST00000226784 2852 ntBASIC8.52□□□□□ -1.04
Cfap99A0A140LIX9 Gm6866-201ENSMUST00000188559 2549 ntBASIC8.52□□□□□ -1.04
Cfap99A0A140LIX9 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Cfap99A0A140LIX9 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Gm22707-201ENSMUST00000103834 110 ntBASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Gm5255-201ENSMUST00000120125 642 ntBASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Gm28929-201ENSMUST00000185330 1193 ntBASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Gm5261-201ENSMUST00000185860 713 ntBASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Gm9114-201ENSMUST00000188558 997 ntBASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Gm17965-201ENSMUST00000193904 517 ntBASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Gm44856-201ENSMUST00000206639 304 ntBASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Grik1-209ENSMUST00000227986 2942 ntBASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Gm44898-201ENSMUST00000205934 2223 ntBASIC8.52□□□□□ -1.05
Cfap99A0A140LIX9 Gm37304-201ENSMUST00000193833 2886 ntBASIC8.51□□□□□ -1.05
Cfap99A0A140LIX9 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cfap99A0A140LIX9 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cfap99A0A140LIX9 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cfap99A0A140LIX9 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC8.51□□□□□ -1.05
Cfap99A0A140LIX9 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Cfap99A0A140LIX9 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms