Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm12931-201ENSMUST00000117046 324 ntBASIC7.01□□□□□ -1.29
Msh4Q99MT2 Gm11880-201ENSMUST00000117612 399 ntBASIC7.01□□□□□ -1.29
Msh4Q99MT2 Gm14791-201ENSMUST00000119061 1166 ntBASIC7.01□□□□□ -1.29
Msh4Q99MT2 Gm12459-201ENSMUST00000120659 356 ntBASIC7.01□□□□□ -1.29
Msh4Q99MT2 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC7.01□□□□□ -1.29
Msh4Q99MT2 Trav8-2-201ENSMUST00000130122 337 ntBASIC7.01□□□□□ -1.29
Msh4Q99MT2 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC7.01□□□□□ -1.29
Msh4Q99MT2 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC7.01□□□□□ -1.29
Msh4Q99MT2 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC7.01□□□□□ -1.29
Msh4Q99MT2 Gm20702-201ENSMUST00000176181 460 ntBASIC7.01□□□□□ -1.29
Msh4Q99MT2 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC7.01□□□□□ -1.29
Msh4Q99MT2 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC7.01□□□□□ -1.29
Msh4Q99MT2 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC7.01□□□□□ -1.29
Msh4Q99MT2 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC7.01□□□□□ -1.29
Msh4Q99MT2 Gm44044-201ENSMUST00000205178 1089 ntBASIC7.01□□□□□ -1.29
Msh4Q99MT2 Gm45198-201ENSMUST00000206796 591 ntBASIC7.01□□□□□ -1.29
Msh4Q99MT2 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC7.01□□□□□ -1.29
Msh4Q99MT2 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC7.01□□□□□ -1.29
Msh4Q99MT2 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC7.01□□□□□ -1.29
Msh4Q99MT2 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Msh4Q99MT2 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Msh4Q99MT2 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Msh4Q99MT2 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC7.01□□□□□ -1.29
Msh4Q99MT2 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Msh4Q99MT2 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Msh4Q99MT2 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC7.01□□□□□ -1.29
Msh4Q99MT2 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Msh4Q99MT2 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Msh4Q99MT2 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Msh4Q99MT2 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Msh4Q99MT2 Gm30698-201ENSMUST00000214789 3198 ntBASIC7.01□□□□□ -1.29
Msh4Q99MT2 Gm43982-201ENSMUST00000204995 1829 ntBASIC7.01□□□□□ -1.29
Msh4Q99MT2 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Msh4Q99MT2 Gm18537-202ENSMUST00000206215 1503 ntBASIC7.01□□□□□ -1.29
Msh4Q99MT2 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Msh4Q99MT2 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Msh4Q99MT2 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Msh4Q99MT2 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Msh4Q99MT2 AC122426.2-201ENSMUST00000216522 2947 ntBASIC7□□□□□ -1.29
Msh4Q99MT2 Gm28240-201ENSMUST00000187560 2053 ntBASIC7□□□□□ -1.29
Msh4Q99MT2 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
Msh4Q99MT2 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Msh4Q99MT2 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Msh4Q99MT2 Gm45887-201ENSMUST00000212672 2998 ntBASIC7□□□□□ -1.29
Msh4Q99MT2 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC7□□□□□ -1.29
Msh4Q99MT2 Gm43581-201ENSMUST00000196766 2864 ntBASIC7□□□□□ -1.29
Msh4Q99MT2 Gm10693-201ENSMUST00000144146 2037 ntBASIC7□□□□□ -1.29
Msh4Q99MT2 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Msh4Q99MT2 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Msh4Q99MT2 Gm29670-201ENSMUST00000190228 2491 ntBASIC7□□□□□ -1.29
Msh4Q99MT2 Gm44797-201ENSMUST00000208780 1837 ntBASIC7□□□□□ -1.29
Msh4Q99MT2 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC7□□□□□ -1.29
Msh4Q99MT2 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC7□□□□□ -1.29
Msh4Q99MT2 Gm17184-201ENSMUST00000111864 462 ntBASIC7□□□□□ -1.29
Msh4Q99MT2 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Msh4Q99MT2 Gm15422-201ENSMUST00000117453 541 ntBASIC7□□□□□ -1.29
Msh4Q99MT2 Gm13414-201ENSMUST00000117516 727 ntBASIC7□□□□□ -1.29
Msh4Q99MT2 Gm11517-201ENSMUST00000119491 387 ntBASIC7□□□□□ -1.29
Msh4Q99MT2 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC7□□□□□ -1.29
Msh4Q99MT2 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC7□□□□□ -1.29
Msh4Q99MT2 Gm8046-201ENSMUST00000172151 616 ntBASIC7□□□□□ -1.29
Msh4Q99MT2 Mir3473a-201ENSMUST00000175011 78 ntBASIC7□□□□□ -1.29
Msh4Q99MT2 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC7□□□□□ -1.29
Msh4Q99MT2 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Msh4Q99MT2 Mir7005-201ENSMUST00000185089 69 ntBASIC7□□□□□ -1.29
Msh4Q99MT2 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC7□□□□□ -1.29
Msh4Q99MT2 Gm8921-201ENSMUST00000204306 649 ntBASIC7□□□□□ -1.29
Msh4Q99MT2 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC7□□□□□ -1.29
Msh4Q99MT2 Gm45782-201ENSMUST00000212670 366 ntBASIC7□□□□□ -1.29
Msh4Q99MT2 Gm19056-201ENSMUST00000218220 797 ntBASIC7□□□□□ -1.29
Msh4Q99MT2 AC151904.2-201ENSMUST00000218683 1177 ntBASIC7□□□□□ -1.29
Msh4Q99MT2 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC7□□□□□ -1.29
Msh4Q99MT2 AC133598.2-201ENSMUST00000224302 624 ntBASIC7□□□□□ -1.29
Msh4Q99MT2 AC158981.1-201ENSMUST00000226943 1205 ntBASIC7□□□□□ -1.29
Msh4Q99MT2 AC122309.1-201ENSMUST00000226945 421 ntBASIC7□□□□□ -1.29
Msh4Q99MT2 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC7□□□□□ -1.29
Msh4Q99MT2 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC7□□□□□ -1.29
Msh4Q99MT2 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC7□□□□□ -1.29
Msh4Q99MT2 Gm18451-201ENSMUST00000196759 1719 ntBASIC7□□□□□ -1.29
Msh4Q99MT2 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC7□□□□□ -1.29
Msh4Q99MT2 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Msh4Q99MT2 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
Msh4Q99MT2 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Msh4Q99MT2 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC7□□□□□ -1.29
Msh4Q99MT2 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Msh4Q99MT2 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Msh4Q99MT2 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Msh4Q99MT2 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Msh4Q99MT2 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC7□□□□□ -1.29
Msh4Q99MT2 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Msh4Q99MT2 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Msh4Q99MT2 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC6.99□□□□□ -1.29
Msh4Q99MT2 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Msh4Q99MT2 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Msh4Q99MT2 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Msh4Q99MT2 Gm42969-201ENSMUST00000199858 3631 ntBASIC6.99□□□□□ -1.29
Msh4Q99MT2 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Msh4Q99MT2 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC6.99□□□□□ -1.29
Msh4Q99MT2 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Msh4Q99MT2 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms