Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gm4270-201ENSMUST00000209666 406 ntBASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gm33096-201ENSMUST00000210189 493 ntBASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 AC155941.3-201ENSMUST00000218476 308 ntBASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gm18629-201ENSMUST00000222496 884 ntBASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Mapk9-202ENSMUST00000043321 1297 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Hmgcs1-202ENSMUST00000224188 3464 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gm28720-201ENSMUST00000190728 3156 ntBASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Vegfd-201ENSMUST00000033751 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gm45183-201ENSMUST00000207937 1497 ntBASIC8.88□□□□□ -0.99
Trim47Q8C0E3 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Plat-201ENSMUST00000033941 2525 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gm17575-201ENSMUST00000180437 1991 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Otud7b-203ENSMUST00000098849 8046 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Bicc1-202ENSMUST00000131445 3005 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Sdad1-203ENSMUST00000201143 2156 ntAPPRIS ALT1 TSL 5 BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gm6313-202ENSMUST00000150112 2562 ntTSL 2 BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Cdh13-201ENSMUST00000117160 3785 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gm44013-201ENSMUST00000204392 2262 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 CU024890.1-201ENSMUST00000221361 2019 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gm26014-201ENSMUST00000104405 132 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gm13196-201ENSMUST00000118297 379 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gm15854-201ENSMUST00000118879 808 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gm14907-201ENSMUST00000121948 854 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gm23111-201ENSMUST00000122652 105 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gm16103-201ENSMUST00000163003 1279 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gm6650-201ENSMUST00000166710 614 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gm24754-201ENSMUST00000177997 107 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Mrgprb13-201ENSMUST00000188191 985 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gm6197-201ENSMUST00000192273 454 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gm37463-201ENSMUST00000193819 796 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gm36996-201ENSMUST00000194466 250 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gm35212-201ENSMUST00000196672 606 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gm19134-201ENSMUST00000221203 487 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 AC140451.2-202ENSMUST00000226156 574 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 AC131033.2-201ENSMUST00000228138 1011 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 AC131586.4-201ENSMUST00000228424 668 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 AC152394.2-202ENSMUST00000228503 1064 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gm24268-201ENSMUST00000082990 110 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gm22578-201ENSMUST00000083730 107 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Gm37761-201ENSMUST00000194989 2098 ntBASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Pes1-202ENSMUST00000109985 2923 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Pes1-201ENSMUST00000020705 2911 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Olfr557-202ENSMUST00000215423 2680 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Grk3-201ENSMUST00000065167 6533 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Trim47Q8C0E3 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Grik2-201ENSMUST00000079751 2610 ntTSL 2 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Stat1-212ENSMUST00000191435 2803 ntAPPRIS ALT1 TSL 5 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Gm8836-201ENSMUST00000198196 1348 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 AC162301.1-201ENSMUST00000228785 1542 ntBASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim47Q8C0E3 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms