Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC7.12□□□□□ -1.27
Usp39Q3TIX9 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Usp39Q3TIX9 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Usp39Q3TIX9 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Usp39Q3TIX9 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC7.12□□□□□ -1.27
Usp39Q3TIX9 Gm37274-201ENSMUST00000192167 1682 ntBASIC7.12□□□□□ -1.27
Usp39Q3TIX9 Gm42636-201ENSMUST00000197174 2239 ntBASIC7.12□□□□□ -1.27
Usp39Q3TIX9 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Usp39Q3TIX9 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Usp39Q3TIX9 Gm28583-201ENSMUST00000188903 2141 ntBASIC7.12□□□□□ -1.27
Usp39Q3TIX9 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Usp39Q3TIX9 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm14035-201ENSMUST00000117596 1475 ntBASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm15422-201ENSMUST00000117453 541 ntBASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm15153-201ENSMUST00000119867 274 ntBASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm7571-201ENSMUST00000120252 927 ntBASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm11343-201ENSMUST00000120579 599 ntBASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm11809-201ENSMUST00000120923 950 ntBASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm16147-201ENSMUST00000162143 373 ntBASIC7.11□□□□□ -1.27
Usp39Q3TIX9 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm7502-201ENSMUST00000169235 733 ntBASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm3611-201ENSMUST00000173687 877 ntBASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC7.11□□□□□ -1.27
Usp39Q3TIX9 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm7436-201ENSMUST00000187229 391 ntBASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm20690-202ENSMUST00000195126 355 ntBASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm36932-201ENSMUST00000195226 929 ntBASIC7.11□□□□□ -1.27
Usp39Q3TIX9 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm43531-201ENSMUST00000200676 1114 ntBASIC7.11□□□□□ -1.27
Usp39Q3TIX9 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm2089-201ENSMUST00000218294 479 ntBASIC7.11□□□□□ -1.27
Usp39Q3TIX9 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 AC105407.2-205ENSMUST00000224680 2733 ntBASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm28651-202ENSMUST00000227968 2693 ntBASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm18701-201ENSMUST00000188281 1536 ntBASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm6729-201ENSMUST00000165173 1452 ntBASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Gm37483-201ENSMUST00000194382 1484 ntBASIC7.11□□□□□ -1.27
Usp39Q3TIX9 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Gm44021-201ENSMUST00000203055 3516 ntBASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Gm45221-201ENSMUST00000207822 2272 ntBASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Gm12365-201ENSMUST00000117931 568 ntBASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Gm16056-201ENSMUST00000119293 135 ntBASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Gm15160-201ENSMUST00000120553 907 ntBASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Usp39Q3TIX9 Gm24422-201ENSMUST00000157800 119 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms