Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm45136-201ENSMUST00000205793 943 ntBASIC6.25□□□□□ -1.41
Nkx3-1P97436 CT025685.1-201ENSMUST00000213716 150 ntBASIC6.25□□□□□ -1.41
Nkx3-1P97436 AC124778.1-201ENSMUST00000216013 162 ntBASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm2089-201ENSMUST00000218294 479 ntBASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm10126-201ENSMUST00000221732 168 ntBASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 AC154618.2-201ENSMUST00000228299 452 ntBASIC6.25□□□□□ -1.41
Nkx3-1P97436 AC165155.1-201ENSMUST00000228932 445 ntBASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm2654-201ENSMUST00000221381 1592 ntBASIC6.25□□□□□ -1.41
Nkx3-1P97436 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm42969-201ENSMUST00000199858 3631 ntBASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm43982-201ENSMUST00000204995 1829 ntBASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 AC154141.1-201ENSMUST00000208403 4136 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm5841-201ENSMUST00000195307 2177 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm43537-201ENSMUST00000199064 3110 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm44117-201ENSMUST00000204442 1758 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm25093-201ENSMUST00000103993 132 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm26417-201ENSMUST00000104274 135 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm15422-201ENSMUST00000117453 541 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm14869-201ENSMUST00000119007 884 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm10913-201ENSMUST00000133732 463 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm26183-201ENSMUST00000157685 139 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm8550-201ENSMUST00000161621 653 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm24155-201ENSMUST00000175259 110 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 n-R5s93-201ENSMUST00000180091 119 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm18699-201ENSMUST00000190713 243 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm38218-201ENSMUST00000193555 4689 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm35108-201ENSMUST00000194321 699 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm33191-201ENSMUST00000195604 699 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm2860-201ENSMUST00000199226 707 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm44856-201ENSMUST00000206639 304 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm45900-201ENSMUST00000211879 409 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm18305-201ENSMUST00000216532 2128 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC6.24□□□□□ -1.41
Nkx3-1P97436 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm9110-201ENSMUST00000219035 617 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm35638-201ENSMUST00000220724 652 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm19238-201ENSMUST00000221936 1260 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gpr87-201ENSMUST00000056898 1080 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm23734-201ENSMUST00000083753 109 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Gm37611-201ENSMUST00000195250 2028 ntBASIC6.24□□□□□ -1.41
Nkx3-1P97436 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nkx3-1P97436 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms