Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm25505-201ENSMUST00000157220 246 ntBASIC6.79□□□□□ -1.32
Tnfsf4P43488 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Tnfsf4P43488 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC6.79□□□□□ -1.32
Tnfsf4P43488 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC6.79□□□□□ -1.32
Tnfsf4P43488 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Tnfsf4P43488 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Tnfsf4P43488 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.79□□□□□ -1.32
Tnfsf4P43488 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC6.79□□□□□ -1.32
Tnfsf4P43488 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC6.79□□□□□ -1.32
Tnfsf4P43488 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6.79□□□□□ -1.32
Tnfsf4P43488 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC6.79□□□□□ -1.32
Tnfsf4P43488 Mir6922-201ENSMUST00000185099 66 ntBASIC6.79□□□□□ -1.32
Tnfsf4P43488 Gm43656-201ENSMUST00000197882 434 ntBASIC6.79□□□□□ -1.32
Tnfsf4P43488 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC6.79□□□□□ -1.32
Tnfsf4P43488 Gm45399-201ENSMUST00000209955 1016 ntBASIC6.79□□□□□ -1.32
Tnfsf4P43488 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC6.79□□□□□ -1.32
Tnfsf4P43488 Gm9315-201ENSMUST00000222696 908 ntBASIC6.79□□□□□ -1.32
Tnfsf4P43488 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Tnfsf4P43488 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Tnfsf4P43488 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Tnfsf4P43488 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
Tnfsf4P43488 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC6.79□□□□□ -1.32
Tnfsf4P43488 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Tnfsf4P43488 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
Tnfsf4P43488 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Tnfsf4P43488 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Tnfsf4P43488 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Tnfsf4P43488 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Tnfsf4P43488 Gm42668-201ENSMUST00000200747 2487 ntBASIC6.78□□□□□ -1.32
Tnfsf4P43488 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Tnfsf4P43488 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.78□□□□□ -1.32
Tnfsf4P43488 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.78□□□□□ -1.32
Tnfsf4P43488 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Tnfsf4P43488 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Tnfsf4P43488 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Tnfsf4P43488 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Tnfsf4P43488 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.78□□□□□ -1.32
Tnfsf4P43488 Gm37525-201ENSMUST00000193499 2871 ntBASIC6.78□□□□□ -1.32
Tnfsf4P43488 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Tnfsf4P43488 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.78□□□□□ -1.32
Tnfsf4P43488 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Tnfsf4P43488 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Tnfsf4P43488 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Tnfsf4P43488 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Tnfsf4P43488 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Tnfsf4P43488 Gm24373-201ENSMUST00000104393 132 ntBASIC6.78□□□□□ -1.32
Tnfsf4P43488 Gm23529-201ENSMUST00000104562 132 ntBASIC6.78□□□□□ -1.32
Tnfsf4P43488 Gm14796-201ENSMUST00000121216 959 ntBASIC6.78□□□□□ -1.32
Tnfsf4P43488 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Tnfsf4P43488 Gm16026-205ENSMUST00000162923 641 ntBASIC6.78□□□□□ -1.32
Tnfsf4P43488 Gm8192-201ENSMUST00000182196 958 ntBASIC6.78□□□□□ -1.32
Tnfsf4P43488 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC6.78□□□□□ -1.32
Tnfsf4P43488 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Tnfsf4P43488 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Tnfsf4P43488 Gm42580-201ENSMUST00000197223 753 ntBASIC6.78□□□□□ -1.32
Tnfsf4P43488 Gm9710-201ENSMUST00000198053 499 ntBASIC6.78□□□□□ -1.32
Tnfsf4P43488 Gm42887-201ENSMUST00000202469 1119 ntBASIC6.78□□□□□ -1.32
Tnfsf4P43488 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Tnfsf4P43488 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC6.78□□□□□ -1.32
Tnfsf4P43488 Gm18960-201ENSMUST00000222962 713 ntBASIC6.78□□□□□ -1.32
Tnfsf4P43488 AC159188.3-201ENSMUST00000224199 880 ntBASIC6.78□□□□□ -1.32
Tnfsf4P43488 Zfp874a-208ENSMUST00000225479 1092 ntBASIC6.78□□□□□ -1.32
Tnfsf4P43488 AC131586.4-201ENSMUST00000228424 668 ntBASIC6.78□□□□□ -1.32
Tnfsf4P43488 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC6.78□□□□□ -1.32
Tnfsf4P43488 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Tnfsf4P43488 Gm3555-201ENSMUST00000160287 1395 ntBASIC6.78□□□□□ -1.32
Tnfsf4P43488 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Tnfsf4P43488 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Tnfsf4P43488 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.78□□□□□ -1.32
Tnfsf4P43488 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Tnfsf4P43488 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Tnfsf4P43488 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC6.77□□□□□ -1.32
Tnfsf4P43488 Gm15930-201ENSMUST00000156603 2037 ntBASIC6.77□□□□□ -1.32
Tnfsf4P43488 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Tnfsf4P43488 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.32
Tnfsf4P43488 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.77□□□□□ -1.32
Tnfsf4P43488 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Tnfsf4P43488 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
Tnfsf4P43488 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
Tnfsf4P43488 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Tnfsf4P43488 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC6.77□□□□□ -1.33
Tnfsf4P43488 Gm15665-201ENSMUST00000119116 847 ntBASIC6.77□□□□□ -1.33
Tnfsf4P43488 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Tnfsf4P43488 Gm12123-201ENSMUST00000120348 472 ntBASIC6.77□□□□□ -1.33
Tnfsf4P43488 Gm11257-201ENSMUST00000121313 315 ntBASIC6.77□□□□□ -1.33
Tnfsf4P43488 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Tnfsf4P43488 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Tnfsf4P43488 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC6.77□□□□□ -1.33
Tnfsf4P43488 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC6.77□□□□□ -1.33
Tnfsf4P43488 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Tnfsf4P43488 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC6.77□□□□□ -1.33
Tnfsf4P43488 Gm5181-201ENSMUST00000183140 971 ntBASIC6.77□□□□□ -1.33
Tnfsf4P43488 Gm28341-201ENSMUST00000190883 472 ntBASIC6.77□□□□□ -1.33
Tnfsf4P43488 Gm37678-201ENSMUST00000192908 1146 ntBASIC6.77□□□□□ -1.33
Tnfsf4P43488 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC6.77□□□□□ -1.33
Tnfsf4P43488 Gm38079-201ENSMUST00000195603 154 ntBASIC6.77□□□□□ -1.33
Tnfsf4P43488 Gm23604-202ENSMUST00000198428 137 ntBASIC6.77□□□□□ -1.33
Tnfsf4P43488 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Tnfsf4P43488 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Tnfsf4P43488 AC133948.2-201ENSMUST00000217850 378 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms