Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 AC192091.1-201ENSMUST00000218668 439 ntBASIC7.74□□□□□ -1.17
Usp4P35123 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Usp4P35123 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Usp4P35123 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Usp4P35123 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Usp4P35123 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Usp4P35123 Gm15681-201ENSMUST00000137501 2704 ntBASIC7.74□□□□□ -1.17
Usp4P35123 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Usp4P35123 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Usp4P35123 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Usp4P35123 Gm38288-201ENSMUST00000195330 1320 ntBASIC7.74□□□□□ -1.17
Usp4P35123 CT030185.2-201ENSMUST00000222614 1310 ntBASIC7.74□□□□□ -1.17
Usp4P35123 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Usp4P35123 BC085271-201ENSMUST00000191852 1487 ntBASIC7.74□□□□□ -1.17
Usp4P35123 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Usp4P35123 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Usp4P35123 Gm43422-201ENSMUST00000199780 3571 ntBASIC7.74□□□□□ -1.17
Usp4P35123 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Usp4P35123 Gm38009-201ENSMUST00000194884 3341 ntBASIC7.73□□□□□ -1.17
Usp4P35123 AC144772.2-201ENSMUST00000228830 2859 ntBASIC7.73□□□□□ -1.17
Usp4P35123 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Usp4P35123 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
Usp4P35123 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp4P35123 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Usp4P35123 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Usp4P35123 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp4P35123 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Usp4P35123 Gm9256-201ENSMUST00000198106 1420 ntBASIC7.73□□□□□ -1.17
Usp4P35123 AC159264.1-201ENSMUST00000224844 4257 ntBASIC7.73□□□□□ -1.17
Usp4P35123 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Usp4P35123 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
Usp4P35123 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC7.73□□□□□ -1.17
Usp4P35123 Gm14016-201ENSMUST00000119095 486 ntBASIC7.73□□□□□ -1.17
Usp4P35123 Fau-ps2-201ENSMUST00000119333 371 ntBASIC7.73□□□□□ -1.17
Usp4P35123 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp4P35123 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC7.73□□□□□ -1.17
Usp4P35123 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Usp4P35123 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC7.73□□□□□ -1.17
Usp4P35123 Gm24011-201ENSMUST00000157732 268 ntBASIC7.73□□□□□ -1.17
Usp4P35123 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC7.73□□□□□ -1.17
Usp4P35123 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC7.73□□□□□ -1.17
Usp4P35123 Traj54-201ENSMUST00000165071 54 ntBASIC7.73□□□□□ -1.17
Usp4P35123 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Usp4P35123 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Usp4P35123 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Usp4P35123 Gm8524-201ENSMUST00000186232 379 ntBASIC7.73□□□□□ -1.17
Usp4P35123 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC7.73□□□□□ -1.17
Usp4P35123 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC7.73□□□□□ -1.17
Usp4P35123 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC7.73□□□□□ -1.17
Usp4P35123 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC7.73□□□□□ -1.17
Usp4P35123 Gm9517-201ENSMUST00000195021 874 ntBASIC7.73□□□□□ -1.17
Usp4P35123 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Usp4P35123 Gm43212-201ENSMUST00000198208 394 ntBASIC7.73□□□□□ -1.17
Usp4P35123 Gm7285-201ENSMUST00000198801 580 ntBASIC7.73□□□□□ -1.17
Usp4P35123 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC7.73□□□□□ -1.17
Usp4P35123 Gm5723-201ENSMUST00000203096 432 ntBASIC7.73□□□□□ -1.17
Usp4P35123 Gm44137-201ENSMUST00000203670 367 ntBASIC7.73□□□□□ -1.17
Usp4P35123 Gm44252-201ENSMUST00000204187 330 ntBASIC7.73□□□□□ -1.17
Usp4P35123 Gm18484-201ENSMUST00000204389 991 ntBASIC7.73□□□□□ -1.17
Usp4P35123 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp4P35123 Gm4780-201ENSMUST00000213206 1242 ntBASIC7.73□□□□□ -1.17
Usp4P35123 AC151904.2-201ENSMUST00000218683 1177 ntBASIC7.73□□□□□ -1.17
Usp4P35123 Gm7986-201ENSMUST00000221336 551 ntBASIC7.73□□□□□ -1.17
Usp4P35123 AC163041.1-201ENSMUST00000221984 133 ntBASIC7.73□□□□□ -1.17
Usp4P35123 Gm18629-201ENSMUST00000222496 884 ntBASIC7.73□□□□□ -1.17
Usp4P35123 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp4P35123 Olfr844-201ENSMUST00000054106 930 ntBASIC7.73□□□□□ -1.17
Usp4P35123 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Usp4P35123 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Usp4P35123 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp4P35123 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp4P35123 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Usp4P35123 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC7.73□□□□□ -1.17
Usp4P35123 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp4P35123 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Usp4P35123 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp4P35123 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp4P35123 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Usp4P35123 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Usp4P35123 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Usp4P35123 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp4P35123 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp4P35123 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC7.73□□□□□ -1.17
Usp4P35123 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp4P35123 Gm40778-201ENSMUST00000217825 1344 ntBASIC7.73□□□□□ -1.17
Usp4P35123 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Usp4P35123 Gm14762-201ENSMUST00000105109 1771 ntBASIC7.72□□□□□ -1.17
Usp4P35123 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC7.72□□□□□ -1.17
Usp4P35123 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC7.72□□□□□ -1.17
Usp4P35123 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Usp4P35123 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC7.72□□□□□ -1.17
Usp4P35123 Gm14957-201ENSMUST00000121069 817 ntBASIC7.72□□□□□ -1.17
Usp4P35123 Gm12591-201ENSMUST00000122407 1177 ntBASIC7.72□□□□□ -1.17
Usp4P35123 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Usp4P35123 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 145.3 ms