Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
P06344 Gm15681-201ENSMUST00000137501 2704 ntBASIC6.39□□□□□ -1.39
P06344 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
P06344 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P06344 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P06344 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P06344 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
P06344 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
P06344 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
P06344 Gm12710-201ENSMUST00000119011 216 ntBASIC6.39□□□□□ -1.39
P06344 Gm12944-201ENSMUST00000119262 463 ntBASIC6.39□□□□□ -1.39
P06344 Gm12754-201ENSMUST00000121908 454 ntBASIC6.39□□□□□ -1.39
P06344 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P06344 Gm2709-201ENSMUST00000142979 350 ntBASIC6.39□□□□□ -1.39
P06344 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC6.39□□□□□ -1.39
P06344 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC6.39□□□□□ -1.39
P06344 Gm2976-201ENSMUST00000160362 513 ntBASIC6.39□□□□□ -1.39
P06344 Gm23018-201ENSMUST00000177928 109 ntBASIC6.39□□□□□ -1.39
P06344 Mir6357-201ENSMUST00000184246 104 ntBASIC6.39□□□□□ -1.39
P06344 Gm28580-201ENSMUST00000186767 88 ntBASIC6.39□□□□□ -1.39
P06344 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
P06344 Gm38373-201ENSMUST00000192042 288 ntBASIC6.39□□□□□ -1.39
P06344 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P06344 Gm37295-201ENSMUST00000192186 109 ntBASIC6.39□□□□□ -1.39
P06344 Gm8101-201ENSMUST00000192796 478 ntBASIC6.39□□□□□ -1.39
P06344 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P06344 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC6.39□□□□□ -1.39
P06344 Gm23011-202ENSMUST00000197855 275 ntBASIC6.39□□□□□ -1.39
P06344 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.39□□□□□ -1.39
P06344 Gm9419-201ENSMUST00000200672 567 ntBASIC6.39□□□□□ -1.39
P06344 Gm44147-201ENSMUST00000204658 94 ntBASIC6.39□□□□□ -1.39
P06344 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC6.39□□□□□ -1.39
P06344 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC6.39□□□□□ -1.39
P06344 Gm2398-201ENSMUST00000218347 883 ntBASIC6.39□□□□□ -1.39
P06344 AC155834.1-201ENSMUST00000220033 498 ntBASIC6.39□□□□□ -1.39
P06344 Gm18960-201ENSMUST00000222962 713 ntBASIC6.39□□□□□ -1.39
P06344 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC6.39□□□□□ -1.39
P06344 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P06344 CT009711.2-202ENSMUST00000224538 973 ntBASIC6.39□□□□□ -1.39
P06344 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
P06344 Mir138-2-201ENSMUST00000083578 71 ntBASIC6.39□□□□□ -1.39
P06344 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
P06344 Gm6166-201ENSMUST00000098689 409 ntBASIC6.39□□□□□ -1.39
P06344 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC6.39□□□□□ -1.39
P06344 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
P06344 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P06344 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
P06344 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P06344 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P06344 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
P06344 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC6.39□□□□□ -1.39
P06344 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P06344 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
P06344 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
P06344 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
P06344 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
P06344 Gm8276-201ENSMUST00000192231 1812 ntBASIC6.39□□□□□ -1.39
P06344 Gm29761-201ENSMUST00000215964 1939 ntBASIC6.38□□□□□ -1.39
P06344 Gm37984-201ENSMUST00000191641 3733 ntBASIC6.38□□□□□ -1.39
P06344 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
P06344 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
P06344 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
P06344 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC6.38□□□□□ -1.39
P06344 Gm11245-201ENSMUST00000119419 1037 ntBASIC6.38□□□□□ -1.39
P06344 Gm14728-201ENSMUST00000122196 492 ntBASIC6.38□□□□□ -1.39
P06344 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC6.38□□□□□ -1.39
P06344 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC6.38□□□□□ -1.39
P06344 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC6.38□□□□□ -1.39
P06344 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
P06344 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
P06344 Gm16027-201ENSMUST00000161618 758 ntBASIC6.38□□□□□ -1.39
P06344 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
P06344 Gm17786-201ENSMUST00000182000 427 ntBASIC6.38□□□□□ -1.39
P06344 Gm9556-201ENSMUST00000182938 940 ntBASIC6.38□□□□□ -1.39
P06344 Mir378d-201ENSMUST00000184232 110 ntBASIC6.38□□□□□ -1.39
P06344 Gm5261-201ENSMUST00000185860 713 ntBASIC6.38□□□□□ -1.39
P06344 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
P06344 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
P06344 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC6.38□□□□□ -1.39
P06344 Gm18593-201ENSMUST00000200754 1139 ntBASIC6.38□□□□□ -1.39
P06344 Gm44971-201ENSMUST00000206192 337 ntBASIC6.38□□□□□ -1.39
P06344 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC6.38□□□□□ -1.39
P06344 Gm45509-201ENSMUST00000209624 1229 ntBASIC6.38□□□□□ -1.39
P06344 Gm4247-201ENSMUST00000211441 1042 ntBASIC6.38□□□□□ -1.39
P06344 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
P06344 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC6.38□□□□□ -1.39
P06344 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC6.38□□□□□ -1.39
P06344 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
P06344 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
P06344 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
P06344 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC6.38□□□□□ -1.39
P06344 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC6.38□□□□□ -1.39
P06344 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
P06344 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
P06344 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
P06344 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
P06344 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
P06344 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
P06344 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
P06344 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms