Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
P01852 Gm43168-201ENSMUST00000201039 1612 ntBASIC6.6□□□□□ -1.35
P01852 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
P01852 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
P01852 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
P01852 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC6.6□□□□□ -1.35
P01852 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
P01852 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
P01852 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
P01852 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC6.6□□□□□ -1.35
P01852 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
P01852 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC6.6□□□□□ -1.35
P01852 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
P01852 Gm43533-201ENSMUST00000202933 2936 ntBASIC6.6□□□□□ -1.35
P01852 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC6.59□□□□□ -1.35
P01852 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
P01852 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
P01852 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
P01852 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
P01852 Gm9585-201ENSMUST00000219681 1404 ntBASIC6.59□□□□□ -1.35
P01852 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
P01852 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
P01852 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
P01852 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
P01852 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
P01852 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
P01852 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
P01852 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
P01852 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
P01852 Gm26016-201ENSMUST00000104403 129 ntBASIC6.59□□□□□ -1.35
P01852 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
P01852 Gm14279-201ENSMUST00000117142 332 ntBASIC6.59□□□□□ -1.35
P01852 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC6.59□□□□□ -1.35
P01852 Gm10243-201ENSMUST00000117571 333 ntBASIC6.59□□□□□ -1.35
P01852 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC6.59□□□□□ -1.35
P01852 Gm14485-201ENSMUST00000119489 493 ntBASIC6.59□□□□□ -1.35
P01852 Gm12400-201ENSMUST00000120915 1003 ntBASIC6.59□□□□□ -1.35
P01852 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC6.59□□□□□ -1.35
P01852 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
P01852 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
P01852 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
P01852 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC6.59□□□□□ -1.35
P01852 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC6.59□□□□□ -1.35
P01852 Gm6428-201ENSMUST00000161062 345 ntBASIC6.59□□□□□ -1.35
P01852 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC6.59□□□□□ -1.35
P01852 Gm27218-201ENSMUST00000183745 392 ntBASIC6.59□□□□□ -1.35
P01852 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
P01852 Gm28416-201ENSMUST00000188334 292 ntBASIC6.59□□□□□ -1.35
P01852 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
P01852 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
P01852 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
P01852 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC6.59□□□□□ -1.35
P01852 Gm42734-201ENSMUST00000201656 878 ntBASIC6.59□□□□□ -1.35
P01852 Gm43929-201ENSMUST00000203025 409 ntBASIC6.59□□□□□ -1.35
P01852 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC6.59□□□□□ -1.35
P01852 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC6.59□□□□□ -1.35
P01852 Gm44590-201ENSMUST00000206161 391 ntBASIC6.59□□□□□ -1.35
P01852 Gm7419-201ENSMUST00000209962 925 ntBASIC6.59□□□□□ -1.35
P01852 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC6.59□□□□□ -1.35
P01852 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
P01852 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC6.59□□□□□ -1.35
P01852 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
P01852 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
P01852 Gm10247-201ENSMUST00000090395 333 ntBASIC6.59□□□□□ -1.35
P01852 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
P01852 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
P01852 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
P01852 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
P01852 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
P01852 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC6.59□□□□□ -1.35
P01852 Gm45876-201ENSMUST00000212698 2709 ntBASIC6.59□□□□□ -1.35
P01852 AL450321.1-201ENSMUST00000220600 3550 ntBASIC6.59□□□□□ -1.35
P01852 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
P01852 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
P01852 AC154270.2-201ENSMUST00000226755 2306 ntBASIC6.59□□□□□ -1.36
P01852 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
P01852 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
P01852 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC6.59□□□□□ -1.36
P01852 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
P01852 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
P01852 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.36
P01852 AC166574.5-201ENSMUST00000227438 1432 ntBASIC6.59□□□□□ -1.36
P01852 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
P01852 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
P01852 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
P01852 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC6.58□□□□□ -1.36
P01852 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
P01852 Gm2108-201ENSMUST00000165058 2177 ntBASIC6.58□□□□□ -1.36
P01852 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC6.58□□□□□ -1.36
P01852 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
P01852 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
P01852 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC6.58□□□□□ -1.36
P01852 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
P01852 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
P01852 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC6.58□□□□□ -1.36
P01852 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC6.58□□□□□ -1.36
P01852 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
P01852 Gm25757-201ENSMUST00000103986 123 ntBASIC6.58□□□□□ -1.36
P01852 Gm22438-201ENSMUST00000104049 132 ntBASIC6.58□□□□□ -1.36
P01852 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms