Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Gm23007-201ENSMUST00000158951 177 ntBASIC7□□□□□ -1.29
Clrn1Q8K445 Gm7281-201ENSMUST00000160010 543 ntBASIC7□□□□□ -1.29
Clrn1Q8K445 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC7□□□□□ -1.29
Clrn1Q8K445 Gm3715-201ENSMUST00000172308 617 ntBASIC7□□□□□ -1.29
Clrn1Q8K445 Mir6940-201ENSMUST00000183447 70 ntBASIC7□□□□□ -1.29
Clrn1Q8K445 Txn-ps1-201ENSMUST00000186385 309 ntBASIC7□□□□□ -1.29
Clrn1Q8K445 Gm8004-201ENSMUST00000187782 617 ntBASIC7□□□□□ -1.29
Clrn1Q8K445 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC7□□□□□ -1.29
Clrn1Q8K445 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC7□□□□□ -1.29
Clrn1Q8K445 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC7□□□□□ -1.29
Clrn1Q8K445 Gm28164-201ENSMUST00000190143 442 ntBASIC7□□□□□ -1.29
Clrn1Q8K445 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC7□□□□□ -1.29
Clrn1Q8K445 Gm43226-201ENSMUST00000202438 259 ntBASIC7□□□□□ -1.29
Clrn1Q8K445 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC7□□□□□ -1.29
Clrn1Q8K445 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC7□□□□□ -1.29
Clrn1Q8K445 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC7□□□□□ -1.29
Clrn1Q8K445 Gm45506-201ENSMUST00000211620 280 ntBASIC7□□□□□ -1.29
Clrn1Q8K445 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC7□□□□□ -1.29
Clrn1Q8K445 AC159297.2-201ENSMUST00000219567 1075 ntBASIC7□□□□□ -1.29
Clrn1Q8K445 AC158392.1-201ENSMUST00000223720 1069 ntBASIC7□□□□□ -1.29
Clrn1Q8K445 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Gm24046-201ENSMUST00000083111 165 ntBASIC7□□□□□ -1.29
Clrn1Q8K445 Gm23102-201ENSMUST00000083724 116 ntBASIC7□□□□□ -1.29
Clrn1Q8K445 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Clrn1Q8K445 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Clrn1Q8K445 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC7□□□□□ -1.29
Clrn1Q8K445 Gm21781-201ENSMUST00000178920 4838 ntBASIC7□□□□□ -1.29
Clrn1Q8K445 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC7□□□□□ -1.29
Clrn1Q8K445 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC7□□□□□ -1.29
Clrn1Q8K445 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Clrn1Q8K445 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Clrn1Q8K445 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Clrn1Q8K445 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Clrn1Q8K445 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC7□□□□□ -1.29
Clrn1Q8K445 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Clrn1Q8K445 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC7□□□□□ -1.29
Clrn1Q8K445 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Clrn1Q8K445 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm12661-201ENSMUST00000118780 3335 ntBASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm15575-201ENSMUST00000119414 1581 ntBASIC6.99□□□□□ -1.29
Clrn1Q8K445 AC154522.1-201ENSMUST00000224647 1903 ntBASIC6.99□□□□□ -1.29
Clrn1Q8K445 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clrn1Q8K445 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC6.99□□□□□ -1.29
Clrn1Q8K445 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm11558-201ENSMUST00000118454 459 ntBASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm13678-201ENSMUST00000118926 340 ntBASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm16056-201ENSMUST00000119293 135 ntBASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm12297-201ENSMUST00000121380 979 ntBASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm7707-201ENSMUST00000165950 1156 ntBASIC6.99□□□□□ -1.29
Clrn1Q8K445 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clrn1Q8K445 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm5334-201ENSMUST00000187472 720 ntBASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm29435-201ENSMUST00000191310 689 ntBASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm38063-201ENSMUST00000193990 342 ntBASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm9497-201ENSMUST00000199908 538 ntBASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm19211-201ENSMUST00000200251 1206 ntBASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm19172-201ENSMUST00000203170 1246 ntBASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm9038-201ENSMUST00000203400 604 ntBASIC6.99□□□□□ -1.29
Clrn1Q8K445 Klra13-ps-203ENSMUST00000204367 850 ntBASIC6.99□□□□□ -1.29
Clrn1Q8K445 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm18193-201ENSMUST00000210017 772 ntBASIC6.99□□□□□ -1.29
Clrn1Q8K445 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC6.99□□□□□ -1.29
Clrn1Q8K445 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms