Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Gabrq-202ENSMUST00000114553 4943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Gys2-201ENSMUST00000032371 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 B020014A21Rik-201ENSMUST00000217333 1938 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Gm11298-201ENSMUST00000120503 1799 ntBASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Mgat4a-201ENSMUST00000042161 7030 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Klf5-202ENSMUST00000226784 2852 ntBASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Nedd4l-204ENSMUST00000224347 3150 ntBASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm43411-201ENSMUST00000196235 1579 ntBASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm14891-201ENSMUST00000117378 596 ntBASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm13878-201ENSMUST00000117986 577 ntBASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm14741-201ENSMUST00000120777 1009 ntBASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm12518-201ENSMUST00000122075 779 ntBASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm4660-201ENSMUST00000131499 403 ntBASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm4373-201ENSMUST00000178571 556 ntBASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Mir7235-201ENSMUST00000183796 56 ntBASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm7369-201ENSMUST00000192738 936 ntBASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm19088-201ENSMUST00000198800 566 ntBASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 AC124778.1-201ENSMUST00000216013 162 ntBASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm6436-201ENSMUST00000077163 451 ntBASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 AC156802.2-201ENSMUST00000225239 5740 ntBASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm23748-201ENSMUST00000104227 131 ntBASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm13754-201ENSMUST00000120486 998 ntBASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm22428-201ENSMUST00000158554 132 ntBASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm45279-201ENSMUST00000210315 391 ntBASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 AC122309.1-201ENSMUST00000226945 421 ntBASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Gm36993-201ENSMUST00000192983 2980 ntBASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Olfr97-203ENSMUST00000213328 2168 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Ccr6-201ENSMUST00000097418 1755 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 Dst-205ENSMUST00000182314 2643 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a6Q8C6K9 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Col6a6Q8C6K9 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col6a6Q8C6K9 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Col6a6Q8C6K9 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col6a6Q8C6K9 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col6a6Q8C6K9 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC6.46□□□□□ -1.37
Col6a6Q8C6K9 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 250.8 ms