Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 Vps8-203ENSMUST00000115397 5032 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 Gm15189-201ENSMUST00000121164 1966 ntBASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 Aldoart1-202ENSMUST00000179234 2050 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 Idi2-201ENSMUST00000038598 2253 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 Mstn-202ENSMUST00000191197 2461 ntTSL 5 BASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 Ptpro-207ENSMUST00000203914 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 Lcorl-201ENSMUST00000016026 4884 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 Tyrp1-201ENSMUST00000006151 2720 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 Supt7l-204ENSMUST00000201769 2548 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 Gm43839-201ENSMUST00000196183 2325 ntBASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 Gm35392-201ENSMUST00000209934 2121 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 Zfp939-201ENSMUST00000061201 2131 ntBASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 Gm17076-201ENSMUST00000165185 1401 ntBASIC7.78□□□□□ -1.16
Pcdh19Q80TF3 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC7.77□□□□□ -1.16
Pcdh19Q80TF3 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm44883-201ENSMUST00000206063 3258 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm11649-201ENSMUST00000118214 375 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm11922-201ENSMUST00000118967 475 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm13921-201ENSMUST00000119411 463 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm11955-201ENSMUST00000119801 470 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm12262-201ENSMUST00000119915 305 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm11891-201ENSMUST00000121241 619 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm14623-201ENSMUST00000121398 603 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm12005-201ENSMUST00000121451 379 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm13586-201ENSMUST00000121784 464 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm16407-201ENSMUST00000122134 567 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Aste1-204ENSMUST00000167674 1227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm20430-201ENSMUST00000172474 207 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm6223-201ENSMUST00000178436 871 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Mir6972-201ENSMUST00000184774 64 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm21489-201ENSMUST00000189668 818 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm6558-202ENSMUST00000192046 180 ntTSL 5 BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm43840-201ENSMUST00000199444 484 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm43659-201ENSMUST00000200894 628 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 AL772397.1-201ENSMUST00000216707 606 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm18892-201ENSMUST00000217628 881 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm5176-201ENSMUST00000218244 1227 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 AC155834.1-201ENSMUST00000220033 498 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 AC159635.1-201ENSMUST00000220905 2102 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm7239-201ENSMUST00000220981 860 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 AC163041.1-201ENSMUST00000221984 133 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 CT025579.4-201ENSMUST00000224598 627 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 CT009556.3-201ENSMUST00000226173 513 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm25852-201ENSMUST00000082790 130 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm24696-201ENSMUST00000083878 134 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Ulk4-201ENSMUST00000051479 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm37334-201ENSMUST00000192325 2938 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 D7Ertd443e-201ENSMUST00000094002 2908 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm16123-201ENSMUST00000118647 1517 ntBASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Gm4767-202ENSMUST00000188096 4725 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Pcdh19Q80TF3 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms