Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm45358-201ENSMUST00000209492 2305 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm38380-201ENSMUST00000195718 2248 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm28240-201ENSMUST00000187560 2053 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm30382-202ENSMUST00000199007 1801 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm35722-201ENSMUST00000218270 1625 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 9530052C20Rik-201ENSMUST00000181882 1372 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm23062-201ENSMUST00000102349 110 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Hist1h4f-201ENSMUST00000102971 391 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Hist1h4h-201ENSMUST00000102972 470 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm13573-201ENSMUST00000116410 631 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm14356-201ENSMUST00000118322 869 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm6292-201ENSMUST00000120712 1095 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Apela-202ENSMUST00000142822 975 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm24011-201ENSMUST00000157732 268 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm23773-201ENSMUST00000158985 296 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm16556-201ENSMUST00000162608 471 ntTSL 5 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm19840-201ENSMUST00000169624 882 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm8604-201ENSMUST00000183150 965 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm37439-201ENSMUST00000193150 856 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm8010-201ENSMUST00000194128 873 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm34006-201ENSMUST00000213985 655 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 AL929555.1-201ENSMUST00000215283 509 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm18899-201ENSMUST00000217663 546 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 AC109214.2-201ENSMUST00000220089 358 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm21321-201ENSMUST00000220179 446 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Cacna2d3-208ENSMUST00000225985 918 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 AC099629.1-201ENSMUST00000226778 464 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm7086-202ENSMUST00000228849 506 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Cox8c-201ENSMUST00000053611 458 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm10029-201ENSMUST00000089635 330 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 6330409D20Rik-201ENSMUST00000009695 1119 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 CT010453.1-201ENSMUST00000226795 2201 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm42969-201ENSMUST00000199858 3631 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm37940-201ENSMUST00000194243 3251 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC7.39□□□□□ -1.23
Scaf4Q6PFF0 Gm38263-201ENSMUST00000195879 3059 ntBASIC7.38□□□□□ -1.23
Scaf4Q6PFF0 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Scaf4Q6PFF0 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Scaf4Q6PFF0 Gm43162-201ENSMUST00000198292 1770 ntBASIC7.38□□□□□ -1.23
Scaf4Q6PFF0 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Scaf4Q6PFF0 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Scaf4Q6PFF0 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC7.38□□□□□ -1.23
Scaf4Q6PFF0 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
Scaf4Q6PFF0 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Scaf4Q6PFF0 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Scaf4Q6PFF0 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Scaf4Q6PFF0 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC7.38□□□□□ -1.23
Scaf4Q6PFF0 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Scaf4Q6PFF0 n-R5s51-201ENSMUST00000104473 123 ntBASIC7.38□□□□□ -1.23
Scaf4Q6PFF0 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC7.38□□□□□ -1.23
Scaf4Q6PFF0 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
Scaf4Q6PFF0 Gm13731-201ENSMUST00000117332 196 ntBASIC7.38□□□□□ -1.23
Scaf4Q6PFF0 Gm15576-201ENSMUST00000117806 583 ntBASIC7.38□□□□□ -1.23
Scaf4Q6PFF0 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC7.38□□□□□ -1.23
Scaf4Q6PFF0 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC7.38□□□□□ -1.23
Scaf4Q6PFF0 Gm11343-201ENSMUST00000120579 599 ntBASIC7.38□□□□□ -1.23
Scaf4Q6PFF0 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms