Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC7.73□□□□□ -1.17
NcanP55066 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC7.73□□□□□ -1.17
NcanP55066 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC7.73□□□□□ -1.17
NcanP55066 AC153557.1-201ENSMUST00000217697 403 ntBASIC7.73□□□□□ -1.17
NcanP55066 Gm3678-201ENSMUST00000218888 492 ntBASIC7.73□□□□□ -1.17
NcanP55066 Gm18405-201ENSMUST00000220743 511 ntBASIC7.73□□□□□ -1.17
NcanP55066 AC164424.3-201ENSMUST00000220809 148 ntBASIC7.73□□□□□ -1.17
NcanP55066 AC166358.8-201ENSMUST00000223288 105 ntBASIC7.73□□□□□ -1.17
NcanP55066 AC124739.1-201ENSMUST00000223433 148 ntBASIC7.73□□□□□ -1.17
NcanP55066 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
NcanP55066 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NcanP55066 Gm10540-201ENSMUST00000097581 276 ntBASIC7.73□□□□□ -1.17
NcanP55066 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
NcanP55066 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NcanP55066 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NcanP55066 Gm44802-201ENSMUST00000208026 1916 ntBASIC7.73□□□□□ -1.17
NcanP55066 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
NcanP55066 Ap3s2-201ENSMUST00000075657 5813 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NcanP55066 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NcanP55066 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NcanP55066 Zscan26-201ENSMUST00000032820 3918 ntTSL 3 BASIC7.73□□□□□ -1.17
NcanP55066 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
NcanP55066 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NcanP55066 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NcanP55066 Gm9575-201ENSMUST00000122140 1339 ntBASIC7.73□□□□□ -1.17
NcanP55066 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
NcanP55066 Gm5903-201ENSMUST00000121836 2325 ntBASIC7.73□□□□□ -1.17
NcanP55066 Col12a1-202ENSMUST00000121227 9953 ntTSL 5 BASIC7.73□□□□□ -1.17
NcanP55066 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NcanP55066 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NcanP55066 Gm43430-201ENSMUST00000196513 3897 ntBASIC7.73□□□□□ -1.17
NcanP55066 Kdm5a-201ENSMUST00000005108 10944 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
NcanP55066 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC7.72□□□□□ -1.17
NcanP55066 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
NcanP55066 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC7.72□□□□□ -1.17
NcanP55066 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NcanP55066 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NcanP55066 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
NcanP55066 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC7.72□□□□□ -1.17
NcanP55066 Ank3-210ENSMUST00000182155 6375 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
NcanP55066 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC7.72□□□□□ -1.17
NcanP55066 Vezt-203ENSMUST00000118205 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
NcanP55066 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC7.72□□□□□ -1.17
NcanP55066 AC158686.1-201ENSMUST00000218068 2332 ntBASIC7.72□□□□□ -1.17
NcanP55066 Arsg-203ENSMUST00000106697 3232 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
NcanP55066 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NcanP55066 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC7.72□□□□□ -1.17
NcanP55066 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC7.72□□□□□ -1.17
NcanP55066 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NcanP55066 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC7.72□□□□□ -1.17
NcanP55066 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NcanP55066 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
NcanP55066 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC7.72□□□□□ -1.17
NcanP55066 Gm13141-201ENSMUST00000117417 456 ntBASIC7.72□□□□□ -1.17
NcanP55066 Gm13357-201ENSMUST00000120528 537 ntBASIC7.72□□□□□ -1.17
NcanP55066 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC7.72□□□□□ -1.17
NcanP55066 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NcanP55066 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NcanP55066 Gm2959-201ENSMUST00000169844 621 ntBASIC7.72□□□□□ -1.17
NcanP55066 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC7.72□□□□□ -1.17
NcanP55066 Gm27348-201ENSMUST00000184511 170 ntBASIC7.72□□□□□ -1.17
NcanP55066 Gm37669-201ENSMUST00000192184 820 ntBASIC7.72□□□□□ -1.17
NcanP55066 Gm38237-201ENSMUST00000193366 376 ntBASIC7.72□□□□□ -1.17
NcanP55066 Gm17965-201ENSMUST00000193904 517 ntBASIC7.72□□□□□ -1.17
NcanP55066 Gm45032-201ENSMUST00000205375 520 ntBASIC7.72□□□□□ -1.17
NcanP55066 Gm9367-201ENSMUST00000205703 546 ntBASIC7.72□□□□□ -1.17
NcanP55066 Gm45514-201ENSMUST00000211531 689 ntBASIC7.72□□□□□ -1.17
NcanP55066 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC7.72□□□□□ -1.17
NcanP55066 AC166358.9-201ENSMUST00000220653 375 ntBASIC7.72□□□□□ -1.17
NcanP55066 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC7.72□□□□□ -1.17
NcanP55066 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC7.72□□□□□ -1.17
NcanP55066 AC154626.1-201ENSMUST00000226070 311 ntBASIC7.72□□□□□ -1.17
NcanP55066 Pes1-202ENSMUST00000109985 2923 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
NcanP55066 Pes1-201ENSMUST00000020705 2911 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
NcanP55066 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
NcanP55066 Phc2-203ENSMUST00000106080 3885 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
NcanP55066 Gm37199-201ENSMUST00000193881 4065 ntBASIC7.72□□□□□ -1.17
NcanP55066 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
NcanP55066 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NcanP55066 Cenpo-205ENSMUST00000140975 4348 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
NcanP55066 Ikbkg-207ENSMUST00000114133 6994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
NcanP55066 Smpd4-203ENSMUST00000090159 4565 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NcanP55066 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
NcanP55066 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NcanP55066 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NcanP55066 Gm12661-201ENSMUST00000118780 3335 ntBASIC7.72□□□□□ -1.17
NcanP55066 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
NcanP55066 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
NcanP55066 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
NcanP55066 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC7.71□□□□□ -1.17
NcanP55066 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
NcanP55066 Gm43168-201ENSMUST00000201039 1612 ntBASIC7.71□□□□□ -1.17
NcanP55066 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
NcanP55066 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
NcanP55066 Gm43750-201ENSMUST00000199027 2493 ntBASIC7.71□□□□□ -1.17
NcanP55066 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
NcanP55066 Mrpl48-201ENSMUST00000064334 1865 ntBASIC7.71□□□□□ -1.18
NcanP55066 Tmem43-201ENSMUST00000032183 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
NcanP55066 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
NcanP55066 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms