Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC7.33□□□□□ -1.24
Atxn1P54254 AC166159.1-201ENSMUST00000227154 1380 ntBASIC7.33□□□□□ -1.24
Atxn1P54254 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Atxn1P54254 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Atxn1P54254 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC7.32□□□□□ -1.24
Atxn1P54254 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Atxn1P54254 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Atxn1P54254 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC7.32□□□□□ -1.24
Atxn1P54254 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC7.32□□□□□ -1.24
Atxn1P54254 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Atxn1P54254 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Atxn1P54254 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Atxn1P54254 Gm9403-201ENSMUST00000196299 2181 ntBASIC7.32□□□□□ -1.24
Atxn1P54254 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Atxn1P54254 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Atxn1P54254 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Atxn1P54254 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Atxn1P54254 Gm11649-201ENSMUST00000118214 375 ntBASIC7.32□□□□□ -1.24
Atxn1P54254 Gm13130-201ENSMUST00000119195 1166 ntBASIC7.32□□□□□ -1.24
Atxn1P54254 Gm13486-201ENSMUST00000119910 282 ntBASIC7.32□□□□□ -1.24
Atxn1P54254 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Atxn1P54254 Gm13669-201ENSMUST00000122366 457 ntBASIC7.32□□□□□ -1.24
Atxn1P54254 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC7.32□□□□□ -1.24
Atxn1P54254 Gm4660-201ENSMUST00000131499 403 ntBASIC7.32□□□□□ -1.24
Atxn1P54254 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Atxn1P54254 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC7.32□□□□□ -1.24
Atxn1P54254 Gm16138-201ENSMUST00000159341 821 ntBASIC7.32□□□□□ -1.24
Atxn1P54254 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC7.32□□□□□ -1.24
Atxn1P54254 Gm5656-201ENSMUST00000171020 1096 ntBASIC7.32□□□□□ -1.24
Atxn1P54254 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC7.32□□□□□ -1.24
Atxn1P54254 Gm7412-201ENSMUST00000191692 605 ntBASIC7.32□□□□□ -1.24
Atxn1P54254 Gm38373-201ENSMUST00000192042 288 ntBASIC7.32□□□□□ -1.24
Atxn1P54254 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Atxn1P54254 Gm37973-201ENSMUST00000195767 1289 ntBASIC7.32□□□□□ -1.24
Atxn1P54254 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Atxn1P54254 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC7.32□□□□□ -1.24
Atxn1P54254 Gm38574-201ENSMUST00000211855 640 ntBASIC7.32□□□□□ -1.24
Atxn1P54254 AC122360.1-201ENSMUST00000217737 624 ntBASIC7.32□□□□□ -1.24
Atxn1P54254 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC7.32□□□□□ -1.24
Atxn1P54254 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Atxn1P54254 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Atxn1P54254 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Atxn1P54254 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Atxn1P54254 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Atxn1P54254 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Atxn1P54254 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Atxn1P54254 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Atxn1P54254 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Atxn1P54254 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Atxn1P54254 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Atxn1P54254 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Atxn1P54254 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC7.32□□□□□ -1.24
Atxn1P54254 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC7.32□□□□□ -1.24
Atxn1P54254 Gm45177-201ENSMUST00000209104 2307 ntBASIC7.32□□□□□ -1.24
Atxn1P54254 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Atxn1P54254 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Atxn1P54254 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Atxn1P54254 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Atxn1P54254 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Atxn1P54254 AC124183.1-201ENSMUST00000222367 2135 ntBASIC7.31□□□□□ -1.24
Atxn1P54254 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Atxn1P54254 AC156163.1-201ENSMUST00000215598 3369 ntBASIC7.31□□□□□ -1.24
Atxn1P54254 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC7.31□□□□□ -1.24
Atxn1P54254 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Atxn1P54254 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
Atxn1P54254 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Atxn1P54254 AC130831.1-201ENSMUST00000224546 1474 ntBASIC7.31□□□□□ -1.24
Atxn1P54254 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC7.31□□□□□ -1.24
Atxn1P54254 Gm8428-201ENSMUST00000159919 1784 ntBASIC7.31□□□□□ -1.24
Atxn1P54254 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC7.31□□□□□ -1.24
Atxn1P54254 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Atxn1P54254 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Atxn1P54254 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC7.31□□□□□ -1.24
Atxn1P54254 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC7.31□□□□□ -1.24
Atxn1P54254 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Atxn1P54254 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Atxn1P54254 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Atxn1P54254 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Atxn1P54254 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC7.31□□□□□ -1.24
Atxn1P54254 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
Atxn1P54254 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Atxn1P54254 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Atxn1P54254 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Atxn1P54254 Gm13900-201ENSMUST00000119402 498 ntBASIC7.31□□□□□ -1.24
Atxn1P54254 Gm12773-201ENSMUST00000120134 587 ntBASIC7.31□□□□□ -1.24
Atxn1P54254 Gm15538-201ENSMUST00000121410 313 ntBASIC7.31□□□□□ -1.24
Atxn1P54254 Gm11188-201ENSMUST00000122382 388 ntBASIC7.31□□□□□ -1.24
Atxn1P54254 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC7.31□□□□□ -1.24
Atxn1P54254 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC7.31□□□□□ -1.24
Atxn1P54254 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Atxn1P54254 Gm10364-202ENSMUST00000153034 1001 ntBASIC7.31□□□□□ -1.24
Atxn1P54254 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Atxn1P54254 Gm16113-201ENSMUST00000159629 372 ntBASIC7.31□□□□□ -1.24
Atxn1P54254 Gm6047-201ENSMUST00000167221 574 ntBASIC7.31□□□□□ -1.24
Atxn1P54254 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC7.31□□□□□ -1.24
Atxn1P54254 Gm23450-201ENSMUST00000178285 91 ntBASIC7.31□□□□□ -1.24
Atxn1P54254 Gm23139-201ENSMUST00000179454 132 ntBASIC7.31□□□□□ -1.24
Atxn1P54254 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC7.31□□□□□ -1.24
Atxn1P54254 Mir8094-201ENSMUST00000183361 117 ntBASIC7.31□□□□□ -1.24
Atxn1P54254 Mir6971-201ENSMUST00000183497 63 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms