Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Cxcl12P40224 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
Cxcl12P40224 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Cxcl12P40224 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
Cxcl12P40224 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Cxcl12P40224 Celf2-223ENSMUST00000182851 3587 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Cxcl12P40224 Gm43099-201ENSMUST00000198943 5241 ntBASIC7.46□□□□□ -1.21
Cxcl12P40224 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Cxcl12P40224 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Cxcl12P40224 Gm16536-201ENSMUST00000162209 1589 ntBASIC7.46□□□□□ -1.21
Cxcl12P40224 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Cxcl12P40224 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Cxcl12P40224 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Cxcl12P40224 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
Cxcl12P40224 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Cxcl12P40224 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Cxcl12P40224 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC7.46□□□□□ -1.22
Cxcl12P40224 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC7.46□□□□□ -1.22
Cxcl12P40224 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Cxcl12P40224 Rimklb-206ENSMUST00000204731 3039 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Cxcl12P40224 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Cxcl12P40224 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Cxcl12P40224 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Cxcl12P40224 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC7.46□□□□□ -1.22
Cxcl12P40224 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Cxcl12P40224 Gm11271-201ENSMUST00000116054 440 ntBASIC7.46□□□□□ -1.22
Cxcl12P40224 Gm4992-201ENSMUST00000120256 768 ntBASIC7.46□□□□□ -1.22
Cxcl12P40224 Gm13357-201ENSMUST00000120528 537 ntBASIC7.46□□□□□ -1.22
Cxcl12P40224 Gm11585-201ENSMUST00000120901 569 ntBASIC7.46□□□□□ -1.22
Cxcl12P40224 Gm15242-201ENSMUST00000122459 283 ntBASIC7.46□□□□□ -1.22
Cxcl12P40224 BC064078-201ENSMUST00000122939 570 ntBASIC7.46□□□□□ -1.22
Cxcl12P40224 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Cxcl12P40224 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC7.46□□□□□ -1.22
Cxcl12P40224 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Cxcl12P40224 Mir6971-201ENSMUST00000183497 63 ntBASIC7.46□□□□□ -1.22
Cxcl12P40224 Gm27653-201ENSMUST00000185037 136 ntBASIC7.46□□□□□ -1.22
Cxcl12P40224 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Cxcl12P40224 Gm35108-201ENSMUST00000194321 699 ntBASIC7.46□□□□□ -1.22
Cxcl12P40224 Gm37285-201ENSMUST00000194465 1139 ntBASIC7.46□□□□□ -1.22
Cxcl12P40224 Gm33191-201ENSMUST00000195604 699 ntBASIC7.46□□□□□ -1.22
Cxcl12P40224 Gm8896-201ENSMUST00000197434 1106 ntBASIC7.46□□□□□ -1.22
Cxcl12P40224 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC7.46□□□□□ -1.22
Cxcl12P40224 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC7.46□□□□□ -1.22
Cxcl12P40224 Gm43459-201ENSMUST00000202093 331 ntBASIC7.46□□□□□ -1.22
Cxcl12P40224 Gm18995-201ENSMUST00000202981 520 ntBASIC7.46□□□□□ -1.22
Cxcl12P40224 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC7.46□□□□□ -1.22
Cxcl12P40224 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Cxcl12P40224 Gm34424-201ENSMUST00000213400 782 ntBASIC7.46□□□□□ -1.22
Cxcl12P40224 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC7.46□□□□□ -1.22
Cxcl12P40224 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC7.46□□□□□ -1.22
Cxcl12P40224 AC132954.2-201ENSMUST00000222400 403 ntBASIC7.46□□□□□ -1.22
Cxcl12P40224 CT009495.1-201ENSMUST00000224221 862 ntBASIC7.46□□□□□ -1.22
Cxcl12P40224 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Cxcl12P40224 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Cxcl12P40224 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Cxcl12P40224 Glod4-206ENSMUST00000169701 4203 ntTSL 2 BASIC7.46□□□□□ -1.22
Cxcl12P40224 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Cxcl12P40224 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Cxcl12P40224 Mapk6-202ENSMUST00000168937 4089 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Cxcl12P40224 Meis1-209ENSMUST00000185131 3346 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Cxcl12P40224 Wdr76-202ENSMUST00000099473 2315 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Cxcl12P40224 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
Cxcl12P40224 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Cxcl12P40224 D630033O11Rik-205ENSMUST00000210802 2761 ntTSL 5 BASIC7.46□□□□□ -1.22
Cxcl12P40224 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Cxcl12P40224 Slco1b2-204ENSMUST00000203597 1965 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Cxcl12P40224 Trpa1-201ENSMUST00000041447 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Cxcl12P40224 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
Cxcl12P40224 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Cxcl12P40224 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Cxcl12P40224 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Cxcl12P40224 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
Cxcl12P40224 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Cxcl12P40224 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Cxcl12P40224 Il1rl1-203ENSMUST00000173514 2661 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Cxcl12P40224 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Cxcl12P40224 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
Cxcl12P40224 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC7.45□□□□□ -1.22
Cxcl12P40224 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Cxcl12P40224 Gm5903-201ENSMUST00000121836 2325 ntBASIC7.45□□□□□ -1.22
Cxcl12P40224 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC7.45□□□□□ -1.22
Cxcl12P40224 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Cxcl12P40224 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Cxcl12P40224 Gm24709-201ENSMUST00000104123 132 ntBASIC7.45□□□□□ -1.22
Cxcl12P40224 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Cxcl12P40224 Gm14580-201ENSMUST00000119122 718 ntBASIC7.45□□□□□ -1.22
Cxcl12P40224 Gm12959-201ENSMUST00000119396 403 ntBASIC7.45□□□□□ -1.22
Cxcl12P40224 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC7.45□□□□□ -1.22
Cxcl12P40224 Gm12152-201ENSMUST00000122465 684 ntBASIC7.45□□□□□ -1.22
Cxcl12P40224 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Cxcl12P40224 Gm26323-201ENSMUST00000157743 175 ntBASIC7.45□□□□□ -1.22
Cxcl12P40224 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.45□□□□□ -1.22
Cxcl12P40224 Gm8241-201ENSMUST00000189286 816 ntBASIC7.45□□□□□ -1.22
Cxcl12P40224 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC7.45□□□□□ -1.22
Cxcl12P40224 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC7.45□□□□□ -1.22
Cxcl12P40224 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC7.45□□□□□ -1.22
Cxcl12P40224 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC7.45□□□□□ -1.22
Cxcl12P40224 AC126685.1-201ENSMUST00000221001 121 ntBASIC7.45□□□□□ -1.22
Cxcl12P40224 AC163651.1-201ENSMUST00000222500 372 ntBASIC7.45□□□□□ -1.22
Cxcl12P40224 Vmn1r41-205ENSMUST00000227630 827 ntBASIC7.45□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms