Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Gm31663-202ENSMUST00000208481 1190 ntBASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Gm7419-201ENSMUST00000209962 925 ntBASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Gm6667-201ENSMUST00000217169 564 ntBASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Gm19217-201ENSMUST00000218238 328 ntBASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Gm32899-201ENSMUST00000219694 207 ntBASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Gm38262-201ENSMUST00000194760 1382 ntBASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC7.78□□□□□ -1.16
Chmp6P0C0A3 AC159264.1-202ENSMUST00000224856 3162 ntBASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Gm37653-201ENSMUST00000195401 3578 ntBASIC7.78□□□□□ -1.16
Chmp6P0C0A3 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Gm26945-201ENSMUST00000183191 2011 ntBASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Sec24c-202ENSMUST00000223751 4196 ntBASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Gm37891-201ENSMUST00000195585 1326 ntBASIC7.78□□□□□ -1.16
Chmp6P0C0A3 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.16
Chmp6P0C0A3 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Gm2108-201ENSMUST00000165058 2177 ntBASIC7.77□□□□□ -1.17
Chmp6P0C0A3 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Chmp6P0C0A3 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Chmp6P0C0A3 AC139758.3-201ENSMUST00000226853 2704 ntBASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Gm42648-201ENSMUST00000200774 2505 ntBASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Gm17170-201ENSMUST00000112785 316 ntBASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Serpina3h-202ENSMUST00000116393 1226 ntBASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Gm13130-201ENSMUST00000119195 1166 ntBASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Gm11320-201ENSMUST00000119434 463 ntBASIC7.77□□□□□ -1.17
Chmp6P0C0A3 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
Chmp6P0C0A3 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Gm19840-201ENSMUST00000169624 882 ntBASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Gm3611-201ENSMUST00000173687 877 ntBASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Gm8305-201ENSMUST00000180022 1195 ntBASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Gm43555-201ENSMUST00000196588 310 ntBASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Gm44258-201ENSMUST00000204925 301 ntBASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Gm44590-201ENSMUST00000206161 391 ntBASIC7.77□□□□□ -1.17
Chmp6P0C0A3 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Gm46379-201ENSMUST00000222551 265 ntBASIC7.77□□□□□ -1.17
Chmp6P0C0A3 AC134869.2-201ENSMUST00000225788 421 ntBASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Chmp6P0C0A3 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Gm42630-201ENSMUST00000195908 3448 ntBASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Chmp6P0C0A3 AC154806.2-201ENSMUST00000227212 2385 ntBASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC7.77□□□□□ -1.17
Chmp6P0C0A3 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Gm37043-201ENSMUST00000194609 3105 ntBASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Gm13776-201ENSMUST00000122236 1261 ntBASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Gm10913-201ENSMUST00000133732 463 ntBASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Gm7651-201ENSMUST00000173398 901 ntBASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Gm28070-201ENSMUST00000191502 445 ntBASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Gm44566-201ENSMUST00000207638 304 ntBASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Gm45432-201ENSMUST00000210391 416 ntBASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Gm6581-201ENSMUST00000214545 260 ntBASIC7.76□□□□□ -1.17
Chmp6P0C0A3 AL591207.2-201ENSMUST00000222991 337 ntBASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC7.76□□□□□ -1.17
Chmp6P0C0A3 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms