Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Hoxa9P09631 Gm9127-201ENSMUST00000188041 985 ntBASIC7.31□□□□□ -1.24
Hoxa9P09631 Gm28416-201ENSMUST00000188334 292 ntBASIC7.31□□□□□ -1.24
Hoxa9P09631 Gm36933-201ENSMUST00000194945 3071 ntBASIC7.31□□□□□ -1.24
Hoxa9P09631 Gm9403-201ENSMUST00000196299 2181 ntBASIC7.31□□□□□ -1.24
Hoxa9P09631 Gm18995-201ENSMUST00000202981 520 ntBASIC7.31□□□□□ -1.24
Hoxa9P09631 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC7.31□□□□□ -1.24
Hoxa9P09631 AC154515.3-201ENSMUST00000225081 1159 ntBASIC7.31□□□□□ -1.24
Hoxa9P09631 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Hoxa9P09631 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Hoxa9P09631 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Hoxa9P09631 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Hoxa9P09631 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Hoxa9P09631 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Hoxa9P09631 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Hoxa9P09631 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Hoxa9P09631 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC7.31□□□□□ -1.24
Hoxa9P09631 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Hoxa9P09631 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Hoxa9P09631 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
Hoxa9P09631 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Hoxa9P09631 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC7.31□□□□□ -1.24
Hoxa9P09631 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Hoxa9P09631 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Hoxa9P09631 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hoxa9P09631 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hoxa9P09631 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC7.3□□□□□ -1.24
Hoxa9P09631 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hoxa9P09631 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Hoxa9P09631 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Hoxa9P09631 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Hoxa9P09631 Gm44553-201ENSMUST00000206316 2037 ntBASIC7.3□□□□□ -1.24
Hoxa9P09631 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Hoxa9P09631 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Hoxa9P09631 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Hoxa9P09631 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hoxa9P09631 Gm20731-201ENSMUST00000193462 2288 ntBASIC7.3□□□□□ -1.24
Hoxa9P09631 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hoxa9P09631 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Hoxa9P09631 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
Hoxa9P09631 Gm18957-201ENSMUST00000197623 1813 ntBASIC7.3□□□□□ -1.24
Hoxa9P09631 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Hoxa9P09631 Gm22707-201ENSMUST00000103834 110 ntBASIC7.3□□□□□ -1.24
Hoxa9P09631 Gm13798-201ENSMUST00000118285 139 ntBASIC7.3□□□□□ -1.24
Hoxa9P09631 Gm14727-201ENSMUST00000118526 525 ntBASIC7.3□□□□□ -1.24
Hoxa9P09631 Gm11338-201ENSMUST00000120086 1160 ntBASIC7.3□□□□□ -1.24
Hoxa9P09631 Gm14721-201ENSMUST00000121381 525 ntBASIC7.3□□□□□ -1.24
Hoxa9P09631 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC7.3□□□□□ -1.24
Hoxa9P09631 Gm11895-201ENSMUST00000122165 467 ntBASIC7.3□□□□□ -1.24
Hoxa9P09631 n-R5s93-201ENSMUST00000180091 119 ntBASIC7.3□□□□□ -1.24
Hoxa9P09631 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hoxa9P09631 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC7.3□□□□□ -1.24
Hoxa9P09631 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hoxa9P09631 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC7.3□□□□□ -1.24
Hoxa9P09631 Gm43926-201ENSMUST00000203978 430 ntBASIC7.3□□□□□ -1.24
Hoxa9P09631 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC7.3□□□□□ -1.24
Hoxa9P09631 Gm45497-201ENSMUST00000211701 740 ntBASIC7.3□□□□□ -1.24
Hoxa9P09631 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hoxa9P09631 AC159205.2-201ENSMUST00000223759 816 ntBASIC7.3□□□□□ -1.24
Hoxa9P09631 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Hoxa9P09631 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Hoxa9P09631 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC7.3□□□□□ -1.24
Hoxa9P09631 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hoxa9P09631 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hoxa9P09631 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hoxa9P09631 Klf10-202ENSMUST00000226363 2917 ntBASIC7.3□□□□□ -1.24
Hoxa9P09631 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Hoxa9P09631 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Hoxa9P09631 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Hoxa9P09631 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Hoxa9P09631 Klf5-202ENSMUST00000226784 2852 ntBASIC7.3□□□□□ -1.24
Hoxa9P09631 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Hoxa9P09631 Gm2654-201ENSMUST00000221381 1592 ntBASIC7.29□□□□□ -1.24
Hoxa9P09631 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC7.29□□□□□ -1.24
Hoxa9P09631 Gm45174-201ENSMUST00000208884 3065 ntBASIC7.29□□□□□ -1.24
Hoxa9P09631 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC7.29□□□□□ -1.24
Hoxa9P09631 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Hoxa9P09631 Gm43533-201ENSMUST00000202933 2936 ntBASIC7.29□□□□□ -1.24
Hoxa9P09631 Grik1-209ENSMUST00000227986 2942 ntBASIC7.29□□□□□ -1.24
Hoxa9P09631 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Hoxa9P09631 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Hoxa9P09631 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
Hoxa9P09631 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Hoxa9P09631 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC7.29□□□□□ -1.24
Hoxa9P09631 Gm25379-201ENSMUST00000104338 114 ntBASIC7.29□□□□□ -1.24
Hoxa9P09631 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Hoxa9P09631 Gm15422-201ENSMUST00000117453 541 ntBASIC7.29□□□□□ -1.24
Hoxa9P09631 Gm13156-201ENSMUST00000118348 321 ntBASIC7.29□□□□□ -1.24
Hoxa9P09631 Gm13282-201ENSMUST00000121577 545 ntBASIC7.29□□□□□ -1.24
Hoxa9P09631 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Hoxa9P09631 Gm28929-201ENSMUST00000185330 1193 ntBASIC7.29□□□□□ -1.24
Hoxa9P09631 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC7.29□□□□□ -1.24
Hoxa9P09631 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC7.29□□□□□ -1.24
Hoxa9P09631 Gm28117-201ENSMUST00000188472 371 ntBASIC7.29□□□□□ -1.24
Hoxa9P09631 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Hoxa9P09631 Gm37526-201ENSMUST00000194640 619 ntBASIC7.29□□□□□ -1.24
Hoxa9P09631 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Hoxa9P09631 Gm21054-201ENSMUST00000203981 380 ntBASIC7.29□□□□□ -1.24
Hoxa9P09631 Gm18960-201ENSMUST00000222962 713 ntBASIC7.29□□□□□ -1.24
Hoxa9P09631 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms