Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Gm29081-203ENSMUST00000190140 1500 ntTSL 5 BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Cxcl2-202ENSMUST00000200681 1859 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Agbl4-201ENSMUST00000080744 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Pln-202ENSMUST00000163319 1715 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 4930488N15Rik-201ENSMUST00000212830 1561 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Gm4275-205ENSMUST00000212624 1436 ntBASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Gm7882-201ENSMUST00000177915 1762 ntBASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Cd300ld-201ENSMUST00000045075 2645 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Mir681-201ENSMUST00000102111 110 ntBASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Gm14362-201ENSMUST00000121679 273 ntBASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Gm15254-201ENSMUST00000149567 273 ntBASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Gm24647-201ENSMUST00000157112 113 ntBASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Gm9672-201ENSMUST00000166437 425 ntBASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Gm18033-201ENSMUST00000186678 550 ntBASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Gm28507-201ENSMUST00000189737 703 ntBASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Gm35106-201ENSMUST00000192731 250 ntBASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Ighv1-30-201ENSMUST00000194082 349 ntBASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Kcnk2-208ENSMUST00000194172 1200 ntTSL 5 BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Ighv1-10-201ENSMUST00000194372 355 ntBASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Gm38167-201ENSMUST00000195704 1178 ntBASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Gm5050-201ENSMUST00000197164 775 ntBASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Gm18131-201ENSMUST00000199241 449 ntBASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Gm44923-201ENSMUST00000206673 85 ntBASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Gm32983-201ENSMUST00000208500 505 ntBASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 AC159208.1-201ENSMUST00000221403 649 ntBASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Gm46389-201ENSMUST00000223199 392 ntBASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 AC165159.2-201ENSMUST00000224080 441 ntBASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 AA474408-201ENSMUST00000098110 3339 ntBASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Gm43756-201ENSMUST00000199788 2838 ntBASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Capn3-202ENSMUST00000028749 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 AC154528.2-201ENSMUST00000228432 3023 ntBASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Nip7-201ENSMUST00000034392 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 4933427I04Rik-201ENSMUST00000097896 2183 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Tmem87a-201ENSMUST00000090042 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Ssb-201ENSMUST00000090852 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Tec-202ENSMUST00000073843 2573 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Zfp462-201ENSMUST00000030131 4823 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Nkx1-1G3UXB3 Olfr63-203ENSMUST00000217023 7023 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Nkx1-1G3UXB3 Dixdc1-206ENSMUST00000120622 1379 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx1-1G3UXB3 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx1-1G3UXB3 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx1-1G3UXB3 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx1-1G3UXB3 Taok3-201ENSMUST00000092889 4354 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Nkx1-1G3UXB3 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC10.52□□□□□ -0.72
Nkx1-1G3UXB3 Mov10-201ENSMUST00000002297 3498 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.72
Nkx1-1G3UXB3 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx1-1G3UXB3 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx1-1G3UXB3 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nkx1-1G3UXB3 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx1-1G3UXB3 Gm5594-201ENSMUST00000172712 1429 ntBASIC10.52□□□□□ -0.73
Nkx1-1G3UXB3 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx1-1G3UXB3 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx1-1G3UXB3 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx1-1G3UXB3 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.52□□□□□ -0.73
Nkx1-1G3UXB3 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx1-1G3UXB3 Gm12686-201ENSMUST00000120546 397 ntBASIC10.52□□□□□ -0.73
Nkx1-1G3UXB3 Gm12542-201ENSMUST00000133015 647 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx1-1G3UXB3 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC10.52□□□□□ -0.73
Nkx1-1G3UXB3 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx1-1G3UXB3 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC10.52□□□□□ -0.73
Nkx1-1G3UXB3 Gm24422-201ENSMUST00000157800 119 ntBASIC10.52□□□□□ -0.73
Nkx1-1G3UXB3 Gm25551-201ENSMUST00000158082 103 ntBASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms