Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Gm38029-201ENSMUST00000192669 2090 ntBASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Gm7435-202ENSMUST00000216003 2424 ntBASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Pdpr-201ENSMUST00000039333 4938 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Gm16487-201ENSMUST00000105048 4037 ntBASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Igkv12-47-201ENSMUST00000196961 356 ntBASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Gm43148-201ENSMUST00000198237 520 ntBASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Gm5554-201ENSMUST00000199726 1206 ntBASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Gm10988-201ENSMUST00000209150 1088 ntBASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 AC154646.1-201ENSMUST00000225011 1092 ntBASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 AC164436.1-201ENSMUST00000227074 772 ntBASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Mir218-2-201ENSMUST00000083649 110 ntBASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Nolc1-203ENSMUST00000223728 3523 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Gm37043-201ENSMUST00000194609 3105 ntBASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Klf5-202ENSMUST00000226784 2852 ntBASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Gm5752-201ENSMUST00000117771 594 ntBASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Gm4587-201ENSMUST00000209135 637 ntBASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 AC154633.1-201ENSMUST00000223276 449 ntBASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Gm37786-201ENSMUST00000191714 3225 ntBASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Gm38386-201ENSMUST00000194293 3421 ntBASIC6.86□□□□□ -1.31
Col6a3E9PWQ3 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 AC155270.1-201ENSMUST00000221626 4028 ntBASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Prkrip1-204ENSMUST00000151786 3893 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Mir466f-4-201ENSMUST00000116930 121 ntBASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Gm16423-201ENSMUST00000120078 947 ntBASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Gm37491-201ENSMUST00000192552 1111 ntBASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Fam19a3-201ENSMUST00000139783 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Adgrl3-219ENSMUST00000122356 4853 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Gm23776-201ENSMUST00000158993 325 ntBASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Gm15838-201ENSMUST00000161575 180 ntBASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Gpm6b-203ENSMUST00000112224 4644 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Mlip-210ENSMUST00000184322 2668 ntTSL 5 BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.85□□□□□ -1.31
Col6a3E9PWQ3 Zdhhc22-202ENSMUST00000222543 3462 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Gm3605-201ENSMUST00000185858 440 ntBASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Gm5324-201ENSMUST00000208115 476 ntBASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Gm2774-201ENSMUST00000213650 1165 ntBASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Sun3-201ENSMUST00000043377 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Tdrd1-204ENSMUST00000121249 5047 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Gm13737-201ENSMUST00000119793 232 ntBASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Gm22024-201ENSMUST00000122733 287 ntBASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC6.84□□□□□ -1.31
Col6a3E9PWQ3 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms