Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm13983-201ENSMUST00000118018 865 ntBASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm7658-201ENSMUST00000119064 1124 ntBASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm22275-201ENSMUST00000122470 310 ntBASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm25219-201ENSMUST00000157545 330 ntBASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm11107-201ENSMUST00000165414 505 ntBASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Ighv1-27-201ENSMUST00000194473 340 ntBASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm37637-201ENSMUST00000195540 1256 ntBASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm8637-201ENSMUST00000212919 1085 ntBASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Gm8058-201ENSMUST00000217247 587 ntBASIC7.32□□□□□ -1.24
Col4a6B1AVK5 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a6B1AVK5 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 B3galt5-202ENSMUST00000113800 5282 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Nos1-202ENSMUST00000102557 4591 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 CR974429.2-201ENSMUST00000221883 1696 ntBASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Gm37633-201ENSMUST00000192858 2700 ntBASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Olfr1410-202ENSMUST00000216553 5433 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 AC158605.4-201ENSMUST00000219013 3361 ntBASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Gm2065-201ENSMUST00000194697 2757 ntBASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Gm10773-201ENSMUST00000218071 3935 ntBASIC7.31□□□□□ -1.24
Col4a6B1AVK5 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Stag1-201ENSMUST00000041418 5909 ntTSL 5 BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Gm44130-201ENSMUST00000205157 3004 ntBASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Gm25904-201ENSMUST00000158491 143 ntBASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Gm19324-201ENSMUST00000213229 1169 ntBASIC7.31□□□□□ -1.24
Col4a6B1AVK5 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 CT009713.5-201ENSMUST00000224508 909 ntBASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Mir135a-1-201ENSMUST00000083473 90 ntBASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Gm22351-201ENSMUST00000083925 107 ntBASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Phldb2-202ENSMUST00000076333 5347 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Gm43789-201ENSMUST00000199275 2472 ntBASIC7.31□□□□□ -1.24
Col4a6B1AVK5 Gm6493-201ENSMUST00000159889 1786 ntBASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Fam168a-205ENSMUST00000207875 4077 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Ctnnd1-217ENSMUST00000111691 5380 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Lig3-211ENSMUST00000173722 5797 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Pkd1l2-202ENSMUST00000109093 7389 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Pkd1l2-201ENSMUST00000098375 7386 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 AC159301.1-202ENSMUST00000225860 2133 ntBASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Isy1-201ENSMUST00000089497 5837 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Mpdz-201ENSMUST00000102830 7512 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Gm37289-201ENSMUST00000195409 1402 ntBASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Gm22194-201ENSMUST00000116869 95 ntBASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Gm13578-201ENSMUST00000120849 590 ntBASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Gm15618-201ENSMUST00000121610 452 ntBASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Gm13642-201ENSMUST00000121697 381 ntBASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Gm5125-201ENSMUST00000148614 624 ntBASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Gm23225-201ENSMUST00000158121 114 ntBASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Gm17137-202ENSMUST00000165729 957 ntBASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Gm4956-202ENSMUST00000178869 672 ntBASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Gm26557-201ENSMUST00000180756 493 ntBASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Gm8241-201ENSMUST00000189286 816 ntBASIC7.3□□□□□ -1.24
Col4a6B1AVK5 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC7.3□□□□□ -1.24
Col4a6B1AVK5 AC154806.5-204ENSMUST00000228900 867 ntBASIC7.3□□□□□ -1.24
Col4a6B1AVK5 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms