Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdfS4R2K0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdfS4R2K0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PdfS4R2K0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PdfS4R2K0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.08□□□□□ -0.16
PdfS4R2K0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdfS4R2K0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdfS4R2K0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PdfS4R2K0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.08□□□□□ -0.16
PdfS4R2K0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdfS4R2K0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PdfS4R2K0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PdfS4R2K0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PdfS4R2K0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdfS4R2K0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PdfS4R2K0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdfS4R2K0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
PdfS4R2K0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.07□□□□□ -0.16
PdfS4R2K0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PdfS4R2K0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 Fst-202ENSMUST00000223640 2612 ntBASIC14.07□□□□□ -0.16
PdfS4R2K0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdfS4R2K0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.06□□□□□ -0.16
PdfS4R2K0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PdfS4R2K0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdfS4R2K0 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.06□□□□□ -0.16
PdfS4R2K0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdfS4R2K0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdfS4R2K0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
PdfS4R2K0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdfS4R2K0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdfS4R2K0 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.06□□□□□ -0.16
PdfS4R2K0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.06□□□□□ -0.16
PdfS4R2K0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.06□□□□□ -0.16
PdfS4R2K0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdfS4R2K0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
PdfS4R2K0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdfS4R2K0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdfS4R2K0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdfS4R2K0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PdfS4R2K0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PdfS4R2K0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdfS4R2K0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdfS4R2K0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PdfS4R2K0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PdfS4R2K0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdfS4R2K0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdfS4R2K0 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.06□□□□□ -0.16
PdfS4R2K0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.06□□□□□ -0.16
PdfS4R2K0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PdfS4R2K0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdfS4R2K0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.06□□□□□ -0.16
PdfS4R2K0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdfS4R2K0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdfS4R2K0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdfS4R2K0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PdfS4R2K0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PdfS4R2K0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PdfS4R2K0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
PdfS4R2K0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdfS4R2K0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PdfS4R2K0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.05□□□□□ -0.16
PdfS4R2K0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdfS4R2K0 Gm27454-201ENSMUST00000185090 204 ntBASIC14.05□□□□□ -0.16
PdfS4R2K0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.05□□□□□ -0.16
PdfS4R2K0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdfS4R2K0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdfS4R2K0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdfS4R2K0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdfS4R2K0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PdfS4R2K0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdfS4R2K0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PdfS4R2K0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdfS4R2K0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdfS4R2K0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdfS4R2K0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdfS4R2K0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms