Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Mrpl40Q9Z2Q5 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.35■□□□□ 0.53
Mrpl40Q9Z2Q5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.35■□□□□ 0.53
Mrpl40Q9Z2Q5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Mrpl40Q9Z2Q5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.35■□□□□ 0.53
Mrpl40Q9Z2Q5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mrpl40Q9Z2Q5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mrpl40Q9Z2Q5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Mrpl40Q9Z2Q5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Mrpl40Q9Z2Q5 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Mrpl40Q9Z2Q5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Mrpl40Q9Z2Q5 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mrpl40Q9Z2Q5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.35■□□□□ 0.53
Mrpl40Q9Z2Q5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mrpl40Q9Z2Q5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mrpl40Q9Z2Q5 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Mrpl40Q9Z2Q5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Mrpl40Q9Z2Q5 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Mrpl40Q9Z2Q5 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mrpl40Q9Z2Q5 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.34■□□□□ 0.53
Mrpl40Q9Z2Q5 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.34■□□□□ 0.53
Mrpl40Q9Z2Q5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.34■□□□□ 0.53
Mrpl40Q9Z2Q5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Mrpl40Q9Z2Q5 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mrpl40Q9Z2Q5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mrpl40Q9Z2Q5 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.34■□□□□ 0.53
Mrpl40Q9Z2Q5 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Mrpl40Q9Z2Q5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mrpl40Q9Z2Q5 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mrpl40Q9Z2Q5 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.33■□□□□ 0.53
Mrpl40Q9Z2Q5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Mrpl40Q9Z2Q5 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.33■□□□□ 0.53
Mrpl40Q9Z2Q5 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.33■□□□□ 0.52
Mrpl40Q9Z2Q5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.33■□□□□ 0.52
Mrpl40Q9Z2Q5 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Mrpl40Q9Z2Q5 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Mrpl40Q9Z2Q5 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Mrpl40Q9Z2Q5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Mrpl40Q9Z2Q5 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mrpl40Q9Z2Q5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
Mrpl40Q9Z2Q5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
Mrpl40Q9Z2Q5 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mrpl40Q9Z2Q5 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl40Q9Z2Q5 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl40Q9Z2Q5 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl40Q9Z2Q5 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Mrpl40Q9Z2Q5 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.32■□□□□ 0.52
Mrpl40Q9Z2Q5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl40Q9Z2Q5 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Mrpl40Q9Z2Q5 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl40Q9Z2Q5 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl40Q9Z2Q5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl40Q9Z2Q5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl40Q9Z2Q5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl40Q9Z2Q5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl40Q9Z2Q5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl40Q9Z2Q5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl40Q9Z2Q5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl40Q9Z2Q5 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl40Q9Z2Q5 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl40Q9Z2Q5 Gm6211-202ENSMUST00000167849 925 ntBASIC18.31■□□□□ 0.52
Mrpl40Q9Z2Q5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl40Q9Z2Q5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.31■□□□□ 0.52
Mrpl40Q9Z2Q5 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl40Q9Z2Q5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl40Q9Z2Q5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl40Q9Z2Q5 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl40Q9Z2Q5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl40Q9Z2Q5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Mrpl40Q9Z2Q5 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Mrpl40Q9Z2Q5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Mrpl40Q9Z2Q5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl40Q9Z2Q5 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl40Q9Z2Q5 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Mrpl40Q9Z2Q5 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl40Q9Z2Q5 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl40Q9Z2Q5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Mrpl40Q9Z2Q5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Mrpl40Q9Z2Q5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Mrpl40Q9Z2Q5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Mrpl40Q9Z2Q5 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.29■□□□□ 0.52
Mrpl40Q9Z2Q5 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Mrpl40Q9Z2Q5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Mrpl40Q9Z2Q5 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mrpl40Q9Z2Q5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Mrpl40Q9Z2Q5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mrpl40Q9Z2Q5 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mrpl40Q9Z2Q5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mrpl40Q9Z2Q5 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Mrpl40Q9Z2Q5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mrpl40Q9Z2Q5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl40Q9Z2Q5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.28■□□□□ 0.52
Mrpl40Q9Z2Q5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Mrpl40Q9Z2Q5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl40Q9Z2Q5 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl40Q9Z2Q5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl40Q9Z2Q5 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.28■□□□□ 0.52
Mrpl40Q9Z2Q5 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl40Q9Z2Q5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl40Q9Z2Q5 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms