Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk1bQ9Z2C6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.06■□□□□ 0.32
Upk1bQ9Z2C6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk1bQ9Z2C6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk1bQ9Z2C6 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.06■□□□□ 0.32
Upk1bQ9Z2C6 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.06■□□□□ 0.32
Upk1bQ9Z2C6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.06■□□□□ 0.32
Upk1bQ9Z2C6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.06■□□□□ 0.32
Upk1bQ9Z2C6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Upk1bQ9Z2C6 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk1bQ9Z2C6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk1bQ9Z2C6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk1bQ9Z2C6 Fst-202ENSMUST00000223640 2612 ntBASIC17.06■□□□□ 0.32
Upk1bQ9Z2C6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk1bQ9Z2C6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk1bQ9Z2C6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk1bQ9Z2C6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk1bQ9Z2C6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk1bQ9Z2C6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Upk1bQ9Z2C6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Upk1bQ9Z2C6 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk1bQ9Z2C6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.05■□□□□ 0.32
Upk1bQ9Z2C6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk1bQ9Z2C6 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk1bQ9Z2C6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk1bQ9Z2C6 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk1bQ9Z2C6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.05■□□□□ 0.32
Upk1bQ9Z2C6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk1bQ9Z2C6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk1bQ9Z2C6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk1bQ9Z2C6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk1bQ9Z2C6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Upk1bQ9Z2C6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk1bQ9Z2C6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Upk1bQ9Z2C6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Upk1bQ9Z2C6 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.04■□□□□ 0.32
Upk1bQ9Z2C6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk1bQ9Z2C6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk1bQ9Z2C6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.04■□□□□ 0.32
Upk1bQ9Z2C6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Upk1bQ9Z2C6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk1bQ9Z2C6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk1bQ9Z2C6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk1bQ9Z2C6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.04■□□□□ 0.32
Upk1bQ9Z2C6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk1bQ9Z2C6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk1bQ9Z2C6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk1bQ9Z2C6 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk1bQ9Z2C6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.03■□□□□ 0.32
Upk1bQ9Z2C6 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk1bQ9Z2C6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk1bQ9Z2C6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk1bQ9Z2C6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk1bQ9Z2C6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk1bQ9Z2C6 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk1bQ9Z2C6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Upk1bQ9Z2C6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.03■□□□□ 0.32
Upk1bQ9Z2C6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Upk1bQ9Z2C6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Upk1bQ9Z2C6 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk1bQ9Z2C6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Upk1bQ9Z2C6 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upk1bQ9Z2C6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upk1bQ9Z2C6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upk1bQ9Z2C6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upk1bQ9Z2C6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.02■□□□□ 0.32
Upk1bQ9Z2C6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.02■□□□□ 0.32
Upk1bQ9Z2C6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.02■□□□□ 0.32
Upk1bQ9Z2C6 Gm45102-201ENSMUST00000207427 857 ntBASIC17.02■□□□□ 0.32
Upk1bQ9Z2C6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.02■□□□□ 0.32
Upk1bQ9Z2C6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upk1bQ9Z2C6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upk1bQ9Z2C6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Upk1bQ9Z2C6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upk1bQ9Z2C6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Upk1bQ9Z2C6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Upk1bQ9Z2C6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Upk1bQ9Z2C6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Upk1bQ9Z2C6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1bQ9Z2C6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1bQ9Z2C6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1bQ9Z2C6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1bQ9Z2C6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1bQ9Z2C6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1bQ9Z2C6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1bQ9Z2C6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1bQ9Z2C6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1bQ9Z2C6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Upk1bQ9Z2C6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1bQ9Z2C6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.01■□□□□ 0.31
Upk1bQ9Z2C6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Upk1bQ9Z2C6 Gm14117-201ENSMUST00000122417 843 ntBASIC17.01■□□□□ 0.31
Upk1bQ9Z2C6 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.01■□□□□ 0.31
Upk1bQ9Z2C6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.01■□□□□ 0.31
Upk1bQ9Z2C6 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.01■□□□□ 0.31
Upk1bQ9Z2C6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1bQ9Z2C6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1bQ9Z2C6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1bQ9Z2C6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk1bQ9Z2C6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms