Protein–RNA interactions for Protein: Q9WTN0

Ggps1, Geranylgeranyl pyrophosphate synthase, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1Q9WTN0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ggps1Q9WTN0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.41■□□□□ 0.86
Ggps1Q9WTN0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ggps1Q9WTN0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Ggps1Q9WTN0 Zfp783-201ENSMUST00000095946 670 ntBASIC20.41■□□□□ 0.86
Ggps1Q9WTN0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ggps1Q9WTN0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ggps1Q9WTN0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ggps1Q9WTN0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ggps1Q9WTN0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ggps1Q9WTN0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ggps1Q9WTN0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ggps1Q9WTN0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ggps1Q9WTN0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ggps1Q9WTN0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Ggps1Q9WTN0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ggps1Q9WTN0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.4■□□□□ 0.86
Ggps1Q9WTN0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ggps1Q9WTN0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ggps1Q9WTN0 Gm37055-201ENSMUST00000191866 133 ntBASIC20.4■□□□□ 0.86
Ggps1Q9WTN0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ggps1Q9WTN0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Ggps1Q9WTN0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Ggps1Q9WTN0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Ggps1Q9WTN0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ggps1Q9WTN0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ggps1Q9WTN0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ggps1Q9WTN0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Ggps1Q9WTN0 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.39■□□□□ 0.85
Ggps1Q9WTN0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.39■□□□□ 0.85
Ggps1Q9WTN0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.39■□□□□ 0.85
Ggps1Q9WTN0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ggps1Q9WTN0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.39■□□□□ 0.85
Ggps1Q9WTN0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ggps1Q9WTN0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ggps1Q9WTN0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ggps1Q9WTN0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ggps1Q9WTN0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.38■□□□□ 0.85
Ggps1Q9WTN0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.38■□□□□ 0.85
Ggps1Q9WTN0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Ggps1Q9WTN0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.38■□□□□ 0.85
Ggps1Q9WTN0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ggps1Q9WTN0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.38■□□□□ 0.85
Ggps1Q9WTN0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Ggps1Q9WTN0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ggps1Q9WTN0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ggps1Q9WTN0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ggps1Q9WTN0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ggps1Q9WTN0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ggps1Q9WTN0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ggps1Q9WTN0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ggps1Q9WTN0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ggps1Q9WTN0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ggps1Q9WTN0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ggps1Q9WTN0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.36■□□□□ 0.85
Ggps1Q9WTN0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ggps1Q9WTN0 Gm15565-201ENSMUST00000118890 427 ntBASIC20.36■□□□□ 0.85
Ggps1Q9WTN0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ggps1Q9WTN0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Ggps1Q9WTN0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ggps1Q9WTN0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ggps1Q9WTN0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ggps1Q9WTN0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ggps1Q9WTN0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ggps1Q9WTN0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ggps1Q9WTN0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ggps1Q9WTN0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ggps1Q9WTN0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ggps1Q9WTN0 Gm13836-201ENSMUST00000121159 501 ntBASIC20.35■□□□□ 0.85
Ggps1Q9WTN0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.35■□□□□ 0.85
Ggps1Q9WTN0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Ggps1Q9WTN0 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.35■□□□□ 0.85
Ggps1Q9WTN0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ggps1Q9WTN0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ggps1Q9WTN0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ggps1Q9WTN0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ggps1Q9WTN0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ggps1Q9WTN0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ggps1Q9WTN0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ggps1Q9WTN0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ggps1Q9WTN0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ggps1Q9WTN0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.34■□□□□ 0.85
Ggps1Q9WTN0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.34■□□□□ 0.85
Ggps1Q9WTN0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Ggps1Q9WTN0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ggps1Q9WTN0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.34■□□□□ 0.85
Ggps1Q9WTN0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ggps1Q9WTN0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ggps1Q9WTN0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ggps1Q9WTN0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ggps1Q9WTN0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Ggps1Q9WTN0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ggps1Q9WTN0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ggps1Q9WTN0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ggps1Q9WTN0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ggps1Q9WTN0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ggps1Q9WTN0 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.33■□□□□ 0.85
Ggps1Q9WTN0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ggps1Q9WTN0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.33■□□□□ 0.85
Ggps1Q9WTN0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms