Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh17Q9R100 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh17Q9R100 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh17Q9R100 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.94■□□□□ 0.46
Cdh17Q9R100 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh17Q9R100 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh17Q9R100 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh17Q9R100 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.94■□□□□ 0.46
Cdh17Q9R100 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh17Q9R100 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh17Q9R100 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.94■□□□□ 0.46
Cdh17Q9R100 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh17Q9R100 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh17Q9R100 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh17Q9R100 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh17Q9R100 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh17Q9R100 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Cdh17Q9R100 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh17Q9R100 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Cdh17Q9R100 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh17Q9R100 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh17Q9R100 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.93■□□□□ 0.46
Cdh17Q9R100 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh17Q9R100 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.92■□□□□ 0.46
Cdh17Q9R100 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh17Q9R100 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh17Q9R100 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh17Q9R100 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.92■□□□□ 0.46
Cdh17Q9R100 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh17Q9R100 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh17Q9R100 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.92■□□□□ 0.46
Cdh17Q9R100 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh17Q9R100 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh17Q9R100 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh17Q9R100 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Cdh17Q9R100 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cdh17Q9R100 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh17Q9R100 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh17Q9R100 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.91■□□□□ 0.46
Cdh17Q9R100 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh17Q9R100 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh17Q9R100 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh17Q9R100 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh17Q9R100 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh17Q9R100 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.91■□□□□ 0.46
Cdh17Q9R100 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh17Q9R100 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh17Q9R100 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh17Q9R100 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cdh17Q9R100 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.9■□□□□ 0.46
Cdh17Q9R100 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh17Q9R100 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.9■□□□□ 0.46
Cdh17Q9R100 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh17Q9R100 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Cdh17Q9R100 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh17Q9R100 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.9■□□□□ 0.46
Cdh17Q9R100 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.9■□□□□ 0.46
Cdh17Q9R100 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh17Q9R100 Fst-202ENSMUST00000223640 2612 ntBASIC17.9■□□□□ 0.46
Cdh17Q9R100 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh17Q9R100 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh17Q9R100 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh17Q9R100 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Cdh17Q9R100 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Cdh17Q9R100 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cdh17Q9R100 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cdh17Q9R100 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cdh17Q9R100 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cdh17Q9R100 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cdh17Q9R100 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cdh17Q9R100 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cdh17Q9R100 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh17Q9R100 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh17Q9R100 Gm13234-201ENSMUST00000120010 747 ntBASIC17.89■□□□□ 0.45
Cdh17Q9R100 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cdh17Q9R100 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.89■□□□□ 0.45
Cdh17Q9R100 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh17Q9R100 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Cdh17Q9R100 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh17Q9R100 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.89■□□□□ 0.45
Cdh17Q9R100 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cdh17Q9R100 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Cdh17Q9R100 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cdh17Q9R100 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh17Q9R100 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh17Q9R100 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh17Q9R100 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh17Q9R100 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh17Q9R100 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh17Q9R100 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh17Q9R100 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
Cdh17Q9R100 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Cdh17Q9R100 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Cdh17Q9R100 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh17Q9R100 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh17Q9R100 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
Cdh17Q9R100 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh17Q9R100 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh17Q9R100 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Cdh17Q9R100 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms