Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a4Q9QZR9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a4Q9QZR9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a4Q9QZR9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a4Q9QZR9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a4Q9QZR9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
Col4a4Q9QZR9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.68■□□□□ 0.58
Col4a4Q9QZR9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a4Q9QZR9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Col4a4Q9QZR9 Gm38027-201ENSMUST00000192315 235 ntBASIC18.68■□□□□ 0.58
Col4a4Q9QZR9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a4Q9QZR9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a4Q9QZR9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a4Q9QZR9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Col4a4Q9QZR9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a4Q9QZR9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a4Q9QZR9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a4Q9QZR9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a4Q9QZR9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.67■□□□□ 0.58
Col4a4Q9QZR9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.67■□□□□ 0.58
Col4a4Q9QZR9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a4Q9QZR9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a4Q9QZR9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Col4a4Q9QZR9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Col4a4Q9QZR9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Col4a4Q9QZR9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a4Q9QZR9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a4Q9QZR9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Col4a4Q9QZR9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a4Q9QZR9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a4Q9QZR9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Col4a4Q9QZR9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a4Q9QZR9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.66■□□□□ 0.58
Col4a4Q9QZR9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a4Q9QZR9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a4Q9QZR9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a4Q9QZR9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col4a4Q9QZR9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.66■□□□□ 0.58
Col4a4Q9QZR9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Col4a4Q9QZR9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a4Q9QZR9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Col4a4Q9QZR9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a4Q9QZR9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a4Q9QZR9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a4Q9QZR9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a4Q9QZR9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a4Q9QZR9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a4Q9QZR9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a4Q9QZR9 Gm2274-201ENSMUST00000184539 609 ntBASIC18.65■□□□□ 0.58
Col4a4Q9QZR9 Gm18669-201ENSMUST00000216049 778 ntBASIC18.65■□□□□ 0.58
Col4a4Q9QZR9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Col4a4Q9QZR9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a4Q9QZR9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a4Q9QZR9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a4Q9QZR9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a4Q9QZR9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Col4a4Q9QZR9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.65■□□□□ 0.58
Col4a4Q9QZR9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col4a4Q9QZR9 Gm16061-201ENSMUST00000122167 857 ntBASIC18.64■□□□□ 0.57
Col4a4Q9QZR9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Col4a4Q9QZR9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.64■□□□□ 0.57
Col4a4Q9QZR9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.64■□□□□ 0.57
Col4a4Q9QZR9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a4Q9QZR9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a4Q9QZR9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a4Q9QZR9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a4Q9QZR9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a4Q9QZR9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a4Q9QZR9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a4Q9QZR9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Col4a4Q9QZR9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col4a4Q9QZR9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Col4a4Q9QZR9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a4Q9QZR9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a4Q9QZR9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Col4a4Q9QZR9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a4Q9QZR9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a4Q9QZR9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a4Q9QZR9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col4a4Q9QZR9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a4Q9QZR9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a4Q9QZR9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.62■□□□□ 0.57
Col4a4Q9QZR9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.62■□□□□ 0.57
Col4a4Q9QZR9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Col4a4Q9QZR9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a4Q9QZR9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a4Q9QZR9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a4Q9QZR9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a4Q9QZR9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Col4a4Q9QZR9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.61■□□□□ 0.57
Col4a4Q9QZR9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.61■□□□□ 0.57
Col4a4Q9QZR9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a4Q9QZR9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.61■□□□□ 0.57
Col4a4Q9QZR9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a4Q9QZR9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a4Q9QZR9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a4Q9QZR9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a4Q9QZR9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a4Q9QZR9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a4Q9QZR9 Gm5587-201ENSMUST00000206270 674 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms