Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Clcf1Q9QZM3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcf1Q9QZM3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcf1Q9QZM3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcf1Q9QZM3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcf1Q9QZM3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Clcf1Q9QZM3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Clcf1Q9QZM3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Clcf1Q9QZM3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clcf1Q9QZM3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcf1Q9QZM3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcf1Q9QZM3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Clcf1Q9QZM3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Clcf1Q9QZM3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.64■□□□□ 0.25
Clcf1Q9QZM3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Clcf1Q9QZM3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.64■□□□□ 0.25
Clcf1Q9QZM3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcf1Q9QZM3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcf1Q9QZM3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clcf1Q9QZM3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcf1Q9QZM3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcf1Q9QZM3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcf1Q9QZM3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcf1Q9QZM3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcf1Q9QZM3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcf1Q9QZM3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcf1Q9QZM3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcf1Q9QZM3 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.63■□□□□ 0.25
Clcf1Q9QZM3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Clcf1Q9QZM3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clcf1Q9QZM3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcf1Q9QZM3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcf1Q9QZM3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.63■□□□□ 0.25
Clcf1Q9QZM3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Clcf1Q9QZM3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Clcf1Q9QZM3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clcf1Q9QZM3 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.63■□□□□ 0.25
Clcf1Q9QZM3 Gm5408-201ENSMUST00000197998 747 ntBASIC16.63■□□□□ 0.25
Clcf1Q9QZM3 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.63■□□□□ 0.25
Clcf1Q9QZM3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcf1Q9QZM3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.63■□□□□ 0.25
Clcf1Q9QZM3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcf1Q9QZM3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.63■□□□□ 0.25
Clcf1Q9QZM3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Clcf1Q9QZM3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcf1Q9QZM3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcf1Q9QZM3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Clcf1Q9QZM3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcf1Q9QZM3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcf1Q9QZM3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcf1Q9QZM3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Clcf1Q9QZM3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcf1Q9QZM3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcf1Q9QZM3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcf1Q9QZM3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcf1Q9QZM3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcf1Q9QZM3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Clcf1Q9QZM3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Clcf1Q9QZM3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
Clcf1Q9QZM3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.62■□□□□ 0.25
Clcf1Q9QZM3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clcf1Q9QZM3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcf1Q9QZM3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcf1Q9QZM3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Clcf1Q9QZM3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Clcf1Q9QZM3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcf1Q9QZM3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcf1Q9QZM3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcf1Q9QZM3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Clcf1Q9QZM3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcf1Q9QZM3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcf1Q9QZM3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.61■□□□□ 0.25
Clcf1Q9QZM3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcf1Q9QZM3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Clcf1Q9QZM3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Clcf1Q9QZM3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clcf1Q9QZM3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.61■□□□□ 0.25
Clcf1Q9QZM3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcf1Q9QZM3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcf1Q9QZM3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clcf1Q9QZM3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcf1Q9QZM3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcf1Q9QZM3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Clcf1Q9QZM3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcf1Q9QZM3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcf1Q9QZM3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clcf1Q9QZM3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Clcf1Q9QZM3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Clcf1Q9QZM3 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.6■□□□□ 0.25
Clcf1Q9QZM3 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.6■□□□□ 0.25
Clcf1Q9QZM3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcf1Q9QZM3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Clcf1Q9QZM3 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.6■□□□□ 0.25
Clcf1Q9QZM3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clcf1Q9QZM3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Clcf1Q9QZM3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Clcf1Q9QZM3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcf1Q9QZM3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.59■□□□□ 0.25
Clcf1Q9QZM3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clcf1Q9QZM3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms