Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Nr2e3Q9QXZ7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nr2e3Q9QXZ7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.83■□□□□ 0.93
Nr2e3Q9QXZ7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Nr2e3Q9QXZ7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nr2e3Q9QXZ7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nr2e3Q9QXZ7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Nr2e3Q9QXZ7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nr2e3Q9QXZ7 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.82■□□□□ 0.92
Nr2e3Q9QXZ7 Gm5408-201ENSMUST00000197998 747 ntBASIC20.82■□□□□ 0.92
Nr2e3Q9QXZ7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nr2e3Q9QXZ7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.81■□□□□ 0.92
Nr2e3Q9QXZ7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nr2e3Q9QXZ7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nr2e3Q9QXZ7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nr2e3Q9QXZ7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nr2e3Q9QXZ7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nr2e3Q9QXZ7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.81■□□□□ 0.92
Nr2e3Q9QXZ7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nr2e3Q9QXZ7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.81■□□□□ 0.92
Nr2e3Q9QXZ7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Nr2e3Q9QXZ7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nr2e3Q9QXZ7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.81■□□□□ 0.92
Nr2e3Q9QXZ7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nr2e3Q9QXZ7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nr2e3Q9QXZ7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nr2e3Q9QXZ7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nr2e3Q9QXZ7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nr2e3Q9QXZ7 Rab3c-203ENSMUST00000224180 967 ntBASIC20.8■□□□□ 0.92
Nr2e3Q9QXZ7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.8■□□□□ 0.92
Nr2e3Q9QXZ7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nr2e3Q9QXZ7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Nr2e3Q9QXZ7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nr2e3Q9QXZ7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nr2e3Q9QXZ7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nr2e3Q9QXZ7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nr2e3Q9QXZ7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nr2e3Q9QXZ7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nr2e3Q9QXZ7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nr2e3Q9QXZ7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nr2e3Q9QXZ7 Gm22325-201ENSMUST00000158904 308 ntBASIC20.79■□□□□ 0.92
Nr2e3Q9QXZ7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nr2e3Q9QXZ7 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nr2e3Q9QXZ7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nr2e3Q9QXZ7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nr2e3Q9QXZ7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nr2e3Q9QXZ7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nr2e3Q9QXZ7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nr2e3Q9QXZ7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nr2e3Q9QXZ7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr2e3Q9QXZ7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr2e3Q9QXZ7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr2e3Q9QXZ7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Nr2e3Q9QXZ7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr2e3Q9QXZ7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.78■□□□□ 0.92
Nr2e3Q9QXZ7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.78■□□□□ 0.92
Nr2e3Q9QXZ7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.78■□□□□ 0.92
Nr2e3Q9QXZ7 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.78■□□□□ 0.92
Nr2e3Q9QXZ7 Gm4968-201ENSMUST00000071458 858 ntBASIC20.78■□□□□ 0.92
Nr2e3Q9QXZ7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr2e3Q9QXZ7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Nr2e3Q9QXZ7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr2e3Q9QXZ7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr2e3Q9QXZ7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr2e3Q9QXZ7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nr2e3Q9QXZ7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nr2e3Q9QXZ7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nr2e3Q9QXZ7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Nr2e3Q9QXZ7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nr2e3Q9QXZ7 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.77■□□□□ 0.92
Nr2e3Q9QXZ7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nr2e3Q9QXZ7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nr2e3Q9QXZ7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nr2e3Q9QXZ7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nr2e3Q9QXZ7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Nr2e3Q9QXZ7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Nr2e3Q9QXZ7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nr2e3Q9QXZ7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nr2e3Q9QXZ7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Nr2e3Q9QXZ7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nr2e3Q9QXZ7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nr2e3Q9QXZ7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nr2e3Q9QXZ7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nr2e3Q9QXZ7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Nr2e3Q9QXZ7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nr2e3Q9QXZ7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.75■□□□□ 0.91
Nr2e3Q9QXZ7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nr2e3Q9QXZ7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nr2e3Q9QXZ7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Nr2e3Q9QXZ7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nr2e3Q9QXZ7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Nr2e3Q9QXZ7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.75■□□□□ 0.91
Nr2e3Q9QXZ7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.75■□□□□ 0.91
Nr2e3Q9QXZ7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Nr2e3Q9QXZ7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.75■□□□□ 0.91
Nr2e3Q9QXZ7 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.75■□□□□ 0.91
Nr2e3Q9QXZ7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.75■□□□□ 0.91
Nr2e3Q9QXZ7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nr2e3Q9QXZ7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nr2e3Q9QXZ7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms