Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a2Q9JLR1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sec61a2Q9JLR1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sec61a2Q9JLR1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sec61a2Q9JLR1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sec61a2Q9JLR1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sec61a2Q9JLR1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sec61a2Q9JLR1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.54■□□□□ 0.24
Sec61a2Q9JLR1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Sec61a2Q9JLR1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Sec61a2Q9JLR1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sec61a2Q9JLR1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sec61a2Q9JLR1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.54■□□□□ 0.24
Sec61a2Q9JLR1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sec61a2Q9JLR1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sec61a2Q9JLR1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
Sec61a2Q9JLR1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sec61a2Q9JLR1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Sec61a2Q9JLR1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sec61a2Q9JLR1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Sec61a2Q9JLR1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sec61a2Q9JLR1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sec61a2Q9JLR1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sec61a2Q9JLR1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sec61a2Q9JLR1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sec61a2Q9JLR1 Gm13234-201ENSMUST00000120010 747 ntBASIC16.53■□□□□ 0.24
Sec61a2Q9JLR1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.53■□□□□ 0.24
Sec61a2Q9JLR1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sec61a2Q9JLR1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sec61a2Q9JLR1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sec61a2Q9JLR1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sec61a2Q9JLR1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.53■□□□□ 0.24
Sec61a2Q9JLR1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sec61a2Q9JLR1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Sec61a2Q9JLR1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sec61a2Q9JLR1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Sec61a2Q9JLR1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Sec61a2Q9JLR1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Sec61a2Q9JLR1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sec61a2Q9JLR1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Sec61a2Q9JLR1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.52■□□□□ 0.24
Sec61a2Q9JLR1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sec61a2Q9JLR1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sec61a2Q9JLR1 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.52■□□□□ 0.24
Sec61a2Q9JLR1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.52■□□□□ 0.24
Sec61a2Q9JLR1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sec61a2Q9JLR1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Sec61a2Q9JLR1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.52■□□□□ 0.24
Sec61a2Q9JLR1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sec61a2Q9JLR1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sec61a2Q9JLR1 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.52■□□□□ 0.23
Sec61a2Q9JLR1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Sec61a2Q9JLR1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sec61a2Q9JLR1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.52■□□□□ 0.23
Sec61a2Q9JLR1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sec61a2Q9JLR1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a2Q9JLR1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a2Q9JLR1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a2Q9JLR1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a2Q9JLR1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Sec61a2Q9JLR1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a2Q9JLR1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.51■□□□□ 0.23
Sec61a2Q9JLR1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.51■□□□□ 0.23
Sec61a2Q9JLR1 AV356131-201ENSMUST00000206201 750 ntBASIC16.51■□□□□ 0.23
Sec61a2Q9JLR1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a2Q9JLR1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a2Q9JLR1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.51■□□□□ 0.23
Sec61a2Q9JLR1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a2Q9JLR1 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.51■□□□□ 0.23
Sec61a2Q9JLR1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.51■□□□□ 0.23
Sec61a2Q9JLR1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a2Q9JLR1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a2Q9JLR1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a2Q9JLR1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a2Q9JLR1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a2Q9JLR1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a2Q9JLR1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a2Q9JLR1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
Sec61a2Q9JLR1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.5■□□□□ 0.23
Sec61a2Q9JLR1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a2Q9JLR1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a2Q9JLR1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a2Q9JLR1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a2Q9JLR1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a2Q9JLR1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a2Q9JLR1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a2Q9JLR1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a2Q9JLR1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a2Q9JLR1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a2Q9JLR1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.5■□□□□ 0.23
Sec61a2Q9JLR1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms