Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.89□□□□□ -0.03
Trem3Q9JKE1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trem3Q9JKE1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trem3Q9JKE1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trem3Q9JKE1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trem3Q9JKE1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trem3Q9JKE1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trem3Q9JKE1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trem3Q9JKE1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trem3Q9JKE1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.88□□□□□ -0.03
Trem3Q9JKE1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
Trem3Q9JKE1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trem3Q9JKE1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trem3Q9JKE1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trem3Q9JKE1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trem3Q9JKE1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trem3Q9JKE1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trem3Q9JKE1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trem3Q9JKE1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trem3Q9JKE1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Trem3Q9JKE1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trem3Q9JKE1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trem3Q9JKE1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trem3Q9JKE1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trem3Q9JKE1 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.87□□□□□ -0.03
Trem3Q9JKE1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trem3Q9JKE1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trem3Q9JKE1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trem3Q9JKE1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trem3Q9JKE1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trem3Q9JKE1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trem3Q9JKE1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trem3Q9JKE1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trem3Q9JKE1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trem3Q9JKE1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trem3Q9JKE1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trem3Q9JKE1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.86□□□□□ -0.03
Trem3Q9JKE1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trem3Q9JKE1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trem3Q9JKE1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trem3Q9JKE1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trem3Q9JKE1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trem3Q9JKE1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem3Q9JKE1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trem3Q9JKE1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem3Q9JKE1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem3Q9JKE1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trem3Q9JKE1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem3Q9JKE1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trem3Q9JKE1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trem3Q9JKE1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trem3Q9JKE1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trem3Q9JKE1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trem3Q9JKE1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Trem3Q9JKE1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem3Q9JKE1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem3Q9JKE1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem3Q9JKE1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem3Q9JKE1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem3Q9JKE1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem3Q9JKE1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trem3Q9JKE1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem3Q9JKE1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trem3Q9JKE1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trem3Q9JKE1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem3Q9JKE1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem3Q9JKE1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem3Q9JKE1 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.84□□□□□ -0.03
Trem3Q9JKE1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem3Q9JKE1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem3Q9JKE1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem3Q9JKE1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem3Q9JKE1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem3Q9JKE1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem3Q9JKE1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem3Q9JKE1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem3Q9JKE1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trem3Q9JKE1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Trem3Q9JKE1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.84□□□□□ -0.03
Trem3Q9JKE1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trem3Q9JKE1 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.84□□□□□ -0.03
Trem3Q9JKE1 Gm8493-201ENSMUST00000196881 489 ntBASIC14.84□□□□□ -0.03
Trem3Q9JKE1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem3Q9JKE1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trem3Q9JKE1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trem3Q9JKE1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trem3Q9JKE1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.83□□□□□ -0.03
Trem3Q9JKE1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trem3Q9JKE1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trem3Q9JKE1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Trem3Q9JKE1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trem3Q9JKE1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trem3Q9JKE1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Trem3Q9JKE1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem3Q9JKE1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Trem3Q9JKE1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.83□□□□□ -0.04
Trem3Q9JKE1 Gm43173-201ENSMUST00000202246 593 ntBASIC14.83□□□□□ -0.04
Trem3Q9JKE1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem3Q9JKE1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trem3Q9JKE1 Gm13241-201ENSMUST00000094493 780 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms