Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup50Q9JIH2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nup50Q9JIH2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Nup50Q9JIH2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Nup50Q9JIH2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup50Q9JIH2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Nup50Q9JIH2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nup50Q9JIH2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nup50Q9JIH2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup50Q9JIH2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup50Q9JIH2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup50Q9JIH2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup50Q9JIH2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.44■□□□□ 0.7
Nup50Q9JIH2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup50Q9JIH2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nup50Q9JIH2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nup50Q9JIH2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.44■□□□□ 0.7
Nup50Q9JIH2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup50Q9JIH2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup50Q9JIH2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup50Q9JIH2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nup50Q9JIH2 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.43■□□□□ 0.7
Nup50Q9JIH2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nup50Q9JIH2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup50Q9JIH2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup50Q9JIH2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup50Q9JIH2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nup50Q9JIH2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nup50Q9JIH2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nup50Q9JIH2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup50Q9JIH2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nup50Q9JIH2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.41■□□□□ 0.7
Nup50Q9JIH2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Nup50Q9JIH2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nup50Q9JIH2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Nup50Q9JIH2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup50Q9JIH2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup50Q9JIH2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Nup50Q9JIH2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup50Q9JIH2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Nup50Q9JIH2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup50Q9JIH2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup50Q9JIH2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup50Q9JIH2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup50Q9JIH2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nup50Q9JIH2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nup50Q9JIH2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup50Q9JIH2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nup50Q9JIH2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup50Q9JIH2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.4■□□□□ 0.7
Nup50Q9JIH2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nup50Q9JIH2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.4■□□□□ 0.7
Nup50Q9JIH2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nup50Q9JIH2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Nup50Q9JIH2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nup50Q9JIH2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nup50Q9JIH2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
Nup50Q9JIH2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Nup50Q9JIH2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup50Q9JIH2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup50Q9JIH2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Nup50Q9JIH2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nup50Q9JIH2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup50Q9JIH2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup50Q9JIH2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup50Q9JIH2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup50Q9JIH2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup50Q9JIH2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup50Q9JIH2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup50Q9JIH2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup50Q9JIH2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup50Q9JIH2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.39■□□□□ 0.69
Nup50Q9JIH2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup50Q9JIH2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nup50Q9JIH2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.38■□□□□ 0.69
Nup50Q9JIH2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nup50Q9JIH2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nup50Q9JIH2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Nup50Q9JIH2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.38■□□□□ 0.69
Nup50Q9JIH2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
Nup50Q9JIH2 Tgds-204ENSMUST00000228543 1594 ntBASIC19.38■□□□□ 0.69
Nup50Q9JIH2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nup50Q9JIH2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nup50Q9JIH2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nup50Q9JIH2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nup50Q9JIH2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nup50Q9JIH2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Nup50Q9JIH2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.38■□□□□ 0.69
Nup50Q9JIH2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nup50Q9JIH2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nup50Q9JIH2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nup50Q9JIH2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup50Q9JIH2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Nup50Q9JIH2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nup50Q9JIH2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup50Q9JIH2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Nup50Q9JIH2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nup50Q9JIH2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nup50Q9JIH2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nup50Q9JIH2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms