Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClpxQ9JHS4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ClpxQ9JHS4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpxQ9JHS4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpxQ9JHS4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpxQ9JHS4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpxQ9JHS4 Gm43173-201ENSMUST00000202246 593 ntBASIC16.8■□□□□ 0.28
ClpxQ9JHS4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpxQ9JHS4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ClpxQ9JHS4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ClpxQ9JHS4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpxQ9JHS4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpxQ9JHS4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpxQ9JHS4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.8■□□□□ 0.28
ClpxQ9JHS4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClpxQ9JHS4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClpxQ9JHS4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.79■□□□□ 0.28
ClpxQ9JHS4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.79■□□□□ 0.28
ClpxQ9JHS4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ClpxQ9JHS4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
ClpxQ9JHS4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
ClpxQ9JHS4 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.79■□□□□ 0.28
ClpxQ9JHS4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ClpxQ9JHS4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClpxQ9JHS4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.79■□□□□ 0.28
ClpxQ9JHS4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClpxQ9JHS4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClpxQ9JHS4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClpxQ9JHS4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClpxQ9JHS4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClpxQ9JHS4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClpxQ9JHS4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ClpxQ9JHS4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ClpxQ9JHS4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ClpxQ9JHS4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ClpxQ9JHS4 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.78■□□□□ 0.28
ClpxQ9JHS4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ClpxQ9JHS4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ClpxQ9JHS4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ClpxQ9JHS4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ClpxQ9JHS4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ClpxQ9JHS4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.78■□□□□ 0.28
ClpxQ9JHS4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.78■□□□□ 0.28
ClpxQ9JHS4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ClpxQ9JHS4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ClpxQ9JHS4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ClpxQ9JHS4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
ClpxQ9JHS4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ClpxQ9JHS4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ClpxQ9JHS4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ClpxQ9JHS4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
ClpxQ9JHS4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
ClpxQ9JHS4 Gm26833-201ENSMUST00000180899 440 ntBASIC16.77■□□□□ 0.28
ClpxQ9JHS4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.77■□□□□ 0.28
ClpxQ9JHS4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.77■□□□□ 0.28
ClpxQ9JHS4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ClpxQ9JHS4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ClpxQ9JHS4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ClpxQ9JHS4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.77■□□□□ 0.28
ClpxQ9JHS4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ClpxQ9JHS4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ClpxQ9JHS4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ClpxQ9JHS4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ClpxQ9JHS4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
ClpxQ9JHS4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ClpxQ9JHS4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ClpxQ9JHS4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ClpxQ9JHS4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ClpxQ9JHS4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ClpxQ9JHS4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ClpxQ9JHS4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
ClpxQ9JHS4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ClpxQ9JHS4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
ClpxQ9JHS4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ClpxQ9JHS4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ClpxQ9JHS4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ClpxQ9JHS4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ClpxQ9JHS4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ClpxQ9JHS4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ClpxQ9JHS4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ClpxQ9JHS4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ClpxQ9JHS4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ClpxQ9JHS4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClpxQ9JHS4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClpxQ9JHS4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClpxQ9JHS4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClpxQ9JHS4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.75■□□□□ 0.27
ClpxQ9JHS4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClpxQ9JHS4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
ClpxQ9JHS4 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.75■□□□□ 0.27
ClpxQ9JHS4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ClpxQ9JHS4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClpxQ9JHS4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ClpxQ9JHS4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.75■□□□□ 0.27
ClpxQ9JHS4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClpxQ9JHS4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClpxQ9JHS4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ClpxQ9JHS4 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.74■□□□□ 0.27
ClpxQ9JHS4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ClpxQ9JHS4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms