Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Col4a3bpQ9EQG9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Col4a3bpQ9EQG9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.09■□□□□ 0.97
Col4a3bpQ9EQG9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Col4a3bpQ9EQG9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Col4a3bpQ9EQG9 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.09■□□□□ 0.97
Col4a3bpQ9EQG9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
Col4a3bpQ9EQG9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col4a3bpQ9EQG9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col4a3bpQ9EQG9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col4a3bpQ9EQG9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Col4a3bpQ9EQG9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Col4a3bpQ9EQG9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.08■□□□□ 0.97
Col4a3bpQ9EQG9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.08■□□□□ 0.97
Col4a3bpQ9EQG9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.08■□□□□ 0.97
Col4a3bpQ9EQG9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Col4a3bpQ9EQG9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Col4a3bpQ9EQG9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Col4a3bpQ9EQG9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Col4a3bpQ9EQG9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.07■□□□□ 0.96
Col4a3bpQ9EQG9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a3bpQ9EQG9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.07■□□□□ 0.96
Col4a3bpQ9EQG9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a3bpQ9EQG9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a3bpQ9EQG9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a3bpQ9EQG9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a3bpQ9EQG9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a3bpQ9EQG9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.07■□□□□ 0.96
Col4a3bpQ9EQG9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a3bpQ9EQG9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a3bpQ9EQG9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a3bpQ9EQG9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a3bpQ9EQG9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Col4a3bpQ9EQG9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a3bpQ9EQG9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a3bpQ9EQG9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a3bpQ9EQG9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a3bpQ9EQG9 Gm13146-201ENSMUST00000118508 780 ntBASIC21.06■□□□□ 0.96
Col4a3bpQ9EQG9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a3bpQ9EQG9 Gm29257-201ENSMUST00000186115 639 ntBASIC21.06■□□□□ 0.96
Col4a3bpQ9EQG9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
Col4a3bpQ9EQG9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a3bpQ9EQG9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a3bpQ9EQG9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC21.06■□□□□ 0.96
Col4a3bpQ9EQG9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a3bpQ9EQG9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a3bpQ9EQG9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a3bpQ9EQG9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col4a3bpQ9EQG9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col4a3bpQ9EQG9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Col4a3bpQ9EQG9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.05■□□□□ 0.96
Col4a3bpQ9EQG9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Col4a3bpQ9EQG9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col4a3bpQ9EQG9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col4a3bpQ9EQG9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col4a3bpQ9EQG9 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.05■□□□□ 0.96
Col4a3bpQ9EQG9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col4a3bpQ9EQG9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col4a3bpQ9EQG9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.04■□□□□ 0.96
Col4a3bpQ9EQG9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Col4a3bpQ9EQG9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col4a3bpQ9EQG9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col4a3bpQ9EQG9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col4a3bpQ9EQG9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col4a3bpQ9EQG9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col4a3bpQ9EQG9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col4a3bpQ9EQG9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col4a3bpQ9EQG9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Col4a3bpQ9EQG9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Col4a3bpQ9EQG9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.04■□□□□ 0.96
Col4a3bpQ9EQG9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col4a3bpQ9EQG9 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.03■□□□□ 0.96
Col4a3bpQ9EQG9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col4a3bpQ9EQG9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Col4a3bpQ9EQG9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.03■□□□□ 0.96
Col4a3bpQ9EQG9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.03■□□□□ 0.96
Col4a3bpQ9EQG9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col4a3bpQ9EQG9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col4a3bpQ9EQG9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Col4a3bpQ9EQG9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Col4a3bpQ9EQG9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col4a3bpQ9EQG9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col4a3bpQ9EQG9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col4a3bpQ9EQG9 Gm7514-201ENSMUST00000209475 934 ntBASIC21.02■□□□□ 0.96
Col4a3bpQ9EQG9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col4a3bpQ9EQG9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col4a3bpQ9EQG9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
Col4a3bpQ9EQG9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a3bpQ9EQG9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a3bpQ9EQG9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a3bpQ9EQG9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.01■□□□□ 0.95
Col4a3bpQ9EQG9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.01■□□□□ 0.95
Col4a3bpQ9EQG9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a3bpQ9EQG9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Col4a3bpQ9EQG9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a3bpQ9EQG9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a3bpQ9EQG9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.01■□□□□ 0.95
Col4a3bpQ9EQG9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a3bpQ9EQG9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col4a3bpQ9EQG9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms