Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cpsf1Q9EPU4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC25.55■■□□□ 1.68
Cpsf1Q9EPU4 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC25.55■■□□□ 1.68
Cpsf1Q9EPU4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Cpsf1Q9EPU4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cpsf1Q9EPU4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cpsf1Q9EPU4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
Cpsf1Q9EPU4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC25.55■■□□□ 1.68
Cpsf1Q9EPU4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Cpsf1Q9EPU4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Cpsf1Q9EPU4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Cpsf1Q9EPU4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Cpsf1Q9EPU4 Nrn1-203ENSMUST00000223611 1443 ntBASIC25.54■■□□□ 1.68
Cpsf1Q9EPU4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Cpsf1Q9EPU4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC25.54■■□□□ 1.68
Cpsf1Q9EPU4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Cpsf1Q9EPU4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Cpsf1Q9EPU4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Cpsf1Q9EPU4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Cpsf1Q9EPU4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Cpsf1Q9EPU4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Cpsf1Q9EPU4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Cpsf1Q9EPU4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC25.53■■□□□ 1.68
Cpsf1Q9EPU4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Cpsf1Q9EPU4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Cpsf1Q9EPU4 Mtag2-201ENSMUST00000058665 714 ntBASIC25.53■■□□□ 1.68
Cpsf1Q9EPU4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC25.52■■□□□ 1.68
Cpsf1Q9EPU4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Cpsf1Q9EPU4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Cpsf1Q9EPU4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Cpsf1Q9EPU4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC25.52■■□□□ 1.68
Cpsf1Q9EPU4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Cpsf1Q9EPU4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Cpsf1Q9EPU4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Cpsf1Q9EPU4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Cpsf1Q9EPU4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Cpsf1Q9EPU4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Cpsf1Q9EPU4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Cpsf1Q9EPU4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Cpsf1Q9EPU4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Cpsf1Q9EPU4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
Cpsf1Q9EPU4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Cpsf1Q9EPU4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Cpsf1Q9EPU4 Gm42922-201ENSMUST00000195887 2078 ntBASIC25.5■■□□□ 1.67
Cpsf1Q9EPU4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Cpsf1Q9EPU4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC25.5■■□□□ 1.67
Cpsf1Q9EPU4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC25.5■■□□□ 1.67
Cpsf1Q9EPU4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Cpsf1Q9EPU4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Cpsf1Q9EPU4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Cpsf1Q9EPU4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC25.49■■□□□ 1.67
Cpsf1Q9EPU4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
Cpsf1Q9EPU4 Gm715-201ENSMUST00000117865 831 ntBASIC25.49■■□□□ 1.67
Cpsf1Q9EPU4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC25.49■■□□□ 1.67
Cpsf1Q9EPU4 Mir2861-201ENSMUST00000175539 82 ntBASIC25.49■■□□□ 1.67
Cpsf1Q9EPU4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Cpsf1Q9EPU4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Cpsf1Q9EPU4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Cpsf1Q9EPU4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Cpsf1Q9EPU4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Cpsf1Q9EPU4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Cpsf1Q9EPU4 AC154649.1-201ENSMUST00000227392 384 ntBASIC25.48■■□□□ 1.67
Cpsf1Q9EPU4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Cpsf1Q9EPU4 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Cpsf1Q9EPU4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Cpsf1Q9EPU4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
Cpsf1Q9EPU4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
Cpsf1Q9EPU4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Cpsf1Q9EPU4 Gm10138-203ENSMUST00000206952 366 ntBASIC25.47■■□□□ 1.67
Cpsf1Q9EPU4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Cpsf1Q9EPU4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Cpsf1Q9EPU4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Cpsf1Q9EPU4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Cpsf1Q9EPU4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Cpsf1Q9EPU4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Cpsf1Q9EPU4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC25.46■■□□□ 1.67
Cpsf1Q9EPU4 Gm6576-201ENSMUST00000169678 883 ntBASIC25.46■■□□□ 1.67
Cpsf1Q9EPU4 H2-K2-201ENSMUST00000174250 1049 ntBASIC25.46■■□□□ 1.67
Cpsf1Q9EPU4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Cpsf1Q9EPU4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Cpsf1Q9EPU4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Cpsf1Q9EPU4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Cpsf1Q9EPU4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Cpsf1Q9EPU4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC25.46■■□□□ 1.67
Cpsf1Q9EPU4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Cpsf1Q9EPU4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Cpsf1Q9EPU4 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Cpsf1Q9EPU4 Mir1199-201ENSMUST00000117015 119 ntBASIC25.46■■□□□ 1.67
Cpsf1Q9EPU4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Cpsf1Q9EPU4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Cpsf1Q9EPU4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Cpsf1Q9EPU4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC25.46■■□□□ 1.67
Cpsf1Q9EPU4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Cpsf1Q9EPU4 Tgds-204ENSMUST00000228543 1594 ntBASIC25.45■■□□□ 1.67
Cpsf1Q9EPU4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Cpsf1Q9EPU4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Cpsf1Q9EPU4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Cpsf1Q9EPU4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Cpsf1Q9EPU4 Gm15375-201ENSMUST00000119510 849 ntBASIC25.45■■□□□ 1.66
Cpsf1Q9EPU4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC25.45■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms